RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 MSANTD1Q6ZTZ1 278 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 INTS8Q75QN2 995 aaKnown RBP1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 MTSS1LQ765P7 747 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 CATSPER4Q7RTX7 472 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 TMEM173Q86WV6 379 aaPredicted RBP1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 ERC1Q8IUD2 1116 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 MB21D2Q8IYB1 491 aaPredicted RBP1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 PEX5LQ8IYB4 626 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 ZNF619Q8N2I2 560 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 GALNT16Q8N428 558 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 SFRP1Q8N474 314 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 SPATA6LQ8N4H0 392 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 KDM1BQ8NB78 822 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 ATAD1Q8NBU5 361 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 SCCPDHQ8NBX0 429 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 OR10S1Q8NGN2 331 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 OR1J2Q8NGS2 313 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 HMGCLL1Q8TB92 370 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 ARRDC2Q8TBH0 407 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 WDR20Q8TBZ3 569 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 HM13Q8TCT9 377 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 UTP15Q8TED0 518 aaKnown RBP1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 TRPC4APQ8TEL6 797 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 MAP4K1Q92918 833 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 SNAPC3Q92966 411 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 TMEM18Q96B42 140 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 SPSB1Q96BD6 273 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 OTULINQ96BN8 352 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 SPACA9Q96E40 222 aaPredicted RBP1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 NLRP4Q96MN2 994 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 DACH2Q96NX9 599 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 NEK1Q96PY6 1258 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 PKP4Q99569 1192 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 PI4K2AQ9BTU6 479 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 CACNG6Q9BXT2 260 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 B3GNT4Q9C0J1 378 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 SLC5A7Q9GZV3 580 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 PPIL3Q9H2H8 161 aaKnown RBP1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 FZD8Q9H461 694 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 RAD21L1Q9H4I0 556 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 PPP1R3EQ9H7J1 279 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 MMRN2Q9H8L6 949 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 SEBOXQ9HB31 216 aaPredicted RBP1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 MID1IP1Q9NPA3 183 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 SPAG4Q9NPE6 437 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 PNRC2Q9NPJ4 139 aaKnown RBP1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 ACSS1Q9NUB1 689 aaPredicted RBP1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 SMPD4Q9NXE4 827 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 CNIH4Q9P003 139 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 UBA2Q9UBT2 640 aaPredicted RBP1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 STK39Q9UEW8 545 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 TSPYL4Q9UJ04 414 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 TMCC3Q9ULS5 477 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 B3GALT5Q9Y2C3 310 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 NFE2L3Q9Y4A8 694 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 STON1Q9Y6Q2 735 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 ABCC9O60706 1549 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 ARHGEF40Q8TER5 1519 aa1.9□□□□□ -2.11
SNORA48.1-201ENST00000390879 SETD1BQ9UPS6 1966 aaKnown RBP1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 A0A0G2JLL6 359 aaPredicted RBP1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 A0A1W2PPC1 479 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 A0A1W2PPM1 405 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 KANSL1LA0AUZ9 987 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 SYCE3A1L190 88 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 GRID2IPA4D2P6 1211 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 TMEM8BA6NDV4 472 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 CCDC69A6NI79 296 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 A6NNC1 897 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 KCNU1A8MYU2 1149 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 TRIM77I1YAP6 450 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 TMEM189-UBE2V1I3L0A0 370 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 M0QZ24 198 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 MEIS2O14770 477 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 PGRMC2O15173 223 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 EIF3DO15371 548 aaKnown RBP eCLIP1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 SLC16A5O15375 505 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 ZBTB43O43298 467 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 PRAMEF11O60813 436 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 PPFIA2O75334 1257 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 SLC22A3O75751 556 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 TOMM70O94826 608 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 REC8O95072 547 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 GCNT3O95395 438 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 PEX11BO96011 259 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 RLN1P04808 185 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 CHRNB1P11230 501 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 PCP11498 1178 aaKnown RBP1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 GAP43P17677 238 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 CASTP20810 708 aaKnown RBP1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 GPD1P21695 349 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 UBA1P22314 1058 aaKnown RBP1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 AVPR1AP37288 418 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 CD86P42081 329 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 RARRES1P49788 294 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 NT5C2P49902 561 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 ZNF131P52739 623 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 SLC12A3P55017 1021 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 HSD17B7P56937 341 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 CD81P60033 236 aa1.89□□□□□ -2.11
SNORA48.1-201ENST00000390879 UBE2V1Q13404 147 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms