RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 PADI1Q9ULC6 663 aa4.35□□□□□ -1.71
SNORA40.2-201ENST00000390847 RSF1Q96T23 1441 aaPredicted RBP4.35□□□□□ -1.71
SNORA40.2-201ENST00000390847 SAA2-SAA4A0A096LPE2 208 aa4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 A0A1W2PQ09 198 aa4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 MAGEA13PA6NCF6 341 aa4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 MAP2K7O14733 419 aa4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 ACOT8O14734 319 aa4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 CSH1P0DML2 217 aa4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 CSH2P0DML3 217 aa4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 S1PR1P21453 382 aa4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 PON1P27169 355 aa4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 CORO1AP31146 461 aaKnown RBP4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 GPR143P51810 404 aa4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 CCDC96Q2M329 555 aa4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 C9orf57Q5W0N0 161 aa4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 TMEM198Q66K66 360 aa4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 C18orf63Q68DL7 685 aa4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 CAPRIN2Q6IMN6 1127 aaKnown RBP4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 BRAT1Q6PJG6 821 aa4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 PRSS57Q6UWY2 283 aa4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 RNF113BQ8IZP6 322 aaKnown RBP4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 KCNH5Q8NCM2 988 aa4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 ACVR1CQ8NER5 493 aa4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 SPATA22Q8NHS9 363 aa4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 FIG4Q92562 907 aa4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 NSUN4Q96CB9 384 aaKnown RBP4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 PCYT2Q99447 389 aa4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 SEMA3CQ99985 751 aa4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 C1QTNF4Q9BXJ3 329 aa4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 CCDC68Q9H2F9 335 aa4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 PADI3Q9ULW8 664 aa4.34□□□□□ -1.71
SNORA40.2-201ENST00000390847 PTPRCP08575 1304 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 PDS5AQ29RF7 1337 aaKnown RBP4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 DENND3A2RUS2 1198 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 C4orf47A7E2U8 309 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 CDRT15L2A8MXV6 281 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 CTDSP2O14595 271 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 ANKRD28O15084 1053 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 SMAD9O15198 467 aaKnown RBP4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 KCNN4O15554 427 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 GJB3O75712 270 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 PPP1R3DO95685 299 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 ACADLP28330 430 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 HOXA13P31271 388 aaPredicted RBP4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 ACTN2P35609 894 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 APOBEC1P41238 236 aaKnown RBP4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 SLC15A1P46059 708 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 AMPHP49418 695 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 BRWD1-AS2P59051 145 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 SLC20A2Q08357 652 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 ACVR2BQ13705 512 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 RAB41Q5JT25 222 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 PLEKHS1Q5SXH7 462 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 IRAK1BP1Q5VVH5 260 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 NSUN5P2Q63ZY6 315 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 PAPD4Q6PIY7 484 aaKnown RBP4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 TSPAN33Q86UF1 283 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 NRROSQ86YC3 692 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 ARID3BQ8IVW6 561 aaPredicted RBP4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 LMO3Q8TAP4 145 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 GSDMBQ8TAX9 411 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 UTP15Q8TED0 518 aaKnown RBP4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 TRPC4APQ8TEL6 797 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 SLC20A1Q8WUM9 679 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 SLC38A5Q8WUX1 472 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 ABTB1Q969K4 478 aaPredicted RBP4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 JAKMIP2Q96AA8 810 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 DUX5Q96PT3 197 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 TMEM39BQ9GZU3 492 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 HRH4Q9H3N8 390 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 MAGIXQ9H6Y5 334 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 DNAJC18Q9H819 358 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 DBNLQ9UJU6 430 aaKnown RBP4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 PCDHGB4Q9UN71 923 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 TMEM5Q9Y2B1 443 aa4.33□□□□□ -1.72
SNORA40.2-201ENST00000390847 LRRC72A6NJI9 287 aa4.32□□□□□ -1.72
SNORA40.2-201ENST00000390847 FAM90A26D6RGX4 464 aa4.32□□□□□ -1.72
SNORA40.2-201ENST00000390847 K7ENM7 598 aa4.32□□□□□ -1.72
SNORA40.2-201ENST00000390847 PLPP2O43688 288 aa4.32□□□□□ -1.72
SNORA40.2-201ENST00000390847 DDNO94850 711 aaPredicted RBP4.32□□□□□ -1.72
SNORA40.2-201ENST00000390847 MYOD1P15172 320 aa4.32□□□□□ -1.72
SNORA40.2-201ENST00000390847 PORP16435 677 aaPredicted RBP4.32□□□□□ -1.72
SNORA40.2-201ENST00000390847 CCKBRP32239 447 aa4.32□□□□□ -1.72
SNORA40.2-201ENST00000390847 USP8P40818 1118 aa4.32□□□□□ -1.72
SNORA40.2-201ENST00000390847 IL15P40933 162 aaPredicted RBP4.32□□□□□ -1.72
SNORA40.2-201ENST00000390847 CLDN20P56880 219 aa4.32□□□□□ -1.72
SNORA40.2-201ENST00000390847 ISL1P61371 349 aa4.32□□□□□ -1.72
SNORA40.2-201ENST00000390847 COG7P83436 770 aa4.32□□□□□ -1.72
SNORA40.2-201ENST00000390847 RELQ04864 619 aaPredicted RBP4.32□□□□□ -1.72
SNORA40.2-201ENST00000390847 EEF1A2Q05639 463 aaKnown RBP4.32□□□□□ -1.72
SNORA40.2-201ENST00000390847 COASYQ13057 564 aa4.32□□□□□ -1.72
SNORA40.2-201ENST00000390847 KCNC3Q14003 757 aa4.32□□□□□ -1.72
SNORA40.2-201ENST00000390847 TMEM35AQ53FP2 167 aa4.32□□□□□ -1.72
SNORA40.2-201ENST00000390847 TRNP1Q6NT89 227 aa4.32□□□□□ -1.72
SNORA40.2-201ENST00000390847 TMED8Q6PL24 325 aaPredicted RBP4.32□□□□□ -1.72
SNORA40.2-201ENST00000390847 UNQ6126/PRO20091Q6UXV3 157 aa4.32□□□□□ -1.72
SNORA40.2-201ENST00000390847 RBM23Q86U06 439 aaKnown RBP4.32□□□□□ -1.72
SNORA40.2-201ENST00000390847 EPHX4Q8IUS5 362 aa4.32□□□□□ -1.72
SNORA40.2-201ENST00000390847 MAP7D3Q8IWC1 876 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms