RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 Q7L0L9 218 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 CBARPQ8N350 705 aaPredicted RBP12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 ZNF513Q8N8E2 541 aaPredicted RBP12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 PPP1R14CQ8TAE6 165 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.11□□□□□ -0.478e-10■■■■■ 87.6
SPTBN1-203ENST00000389980 SARS2Q9NP81 518 aaKnown RBP12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 HEBP1Q9NRV9 189 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 CORO1CQ9ULV4 474 aaPredicted RBP12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 STON1Q9Y6Q2 735 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 CAPN7Q9Y6W3 813 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 CKAP5Q14008 2032 aa12.1□□□□□ -0.47
SPTBN1-203ENST00000389980 SPECC1L-ADORA2AF8WAN1 911 aa12.1□□□□□ -0.47
SPTBN1-203ENST00000389980 MBTPS2O43462 519 aa12.1□□□□□ -0.47
SPTBN1-203ENST00000389980 LYPLA1O75608 230 aaPredicted RBP12.1□□□□□ -0.47
SPTBN1-203ENST00000389980 ITGB6P18564 788 aa12.1□□□□□ -0.47
SPTBN1-203ENST00000389980 ACRV1P26436 265 aa12.1□□□□□ -0.47
SPTBN1-203ENST00000389980 PTGER3P43115 390 aa12.1□□□□□ -0.47
SPTBN1-203ENST00000389980 PREPLQ4J6C6 727 aaPredicted RBP12.1□□□□□ -0.47
SPTBN1-203ENST00000389980 C2orf27AQ580R0 203 aa12.1□□□□□ -0.47
SPTBN1-203ENST00000389980 NAPRTQ6XQN6 538 aa12.1□□□□□ -0.47
SPTBN1-203ENST00000389980 DPPA4Q7L190 304 aa12.1□□□□□ -0.47
SPTBN1-203ENST00000389980 SPATA21Q7Z572 469 aa12.1□□□□□ -0.47
SPTBN1-203ENST00000389980 SIDT2Q8NBJ9 832 aaKnown RBP12.1□□□□□ -0.47
SPTBN1-203ENST00000389980 TMIEQ8NEW7 156 aa12.1□□□□□ -0.47
SPTBN1-203ENST00000389980 SCG3Q8WXD2 468 aaKnown RBP12.1□□□□□ -0.47
SPTBN1-203ENST00000389980 P2RY12Q9H244 342 aa12.1□□□□□ -0.47
SPTBN1-203ENST00000389980 UBE2ZQ9H832 354 aaPredicted RBP12.1□□□□□ -0.47
SPTBN1-203ENST00000389980 KCNK12Q9HB15 430 aa12.1□□□□□ -0.47
SPTBN1-203ENST00000389980 TAS2R13Q9NYV9 303 aa12.1□□□□□ -0.47
SPTBN1-203ENST00000389980 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.1□□□□□ -0.47
SPTBN1-203ENST00000389980 COQ6Q9Y2Z9 468 aa12.1□□□□□ -0.47
SPTBN1-203ENST00000389980 NUMA1Q14980 2115 aa12.1□□□□□ -0.47
SPTBN1-203ENST00000389980 TRBV5-4A0A0C4DH59 114 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 A0A1W2PPC1 479 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 NEMP2A6NFY4 417 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 CCT8L1PA6NM43 557 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 TARM1B6A8C7 271 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 PFDN6O15212 129 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 ZBTB14O43829 449 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 MYL2P10916 166 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 RALBP11234 206 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 ZNF37AP17032 561 aaPredicted RBP12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 CHRM3P20309 590 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 ITGB7P26010 798 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 ARRB2P32121 409 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 CTHP32929 405 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 MMP12P39900 470 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 KCNC1P48547 511 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 PON2Q15165 354 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 FAM83EQ2M2I3 478 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 WLSQ5T9L3 541 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 FBXL19Q6PCT2 694 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 NXPE1Q8N323 547 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 ANKS4BQ8N8V4 417 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 LKAAEAR1Q8TD35 194 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 SPATA16Q9BXB7 569 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 ALG9Q9H6U8 611 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 NPHS2Q9NP85 383 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 PKD2L2Q9NZM6 624 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 TMPRSS11EQ9UL52 423 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 VPS9D1Q9Y2B5 631 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 PLXNA2O75051 1894 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 H3BMM5 538 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 PRMT5O14744 637 aaPredicted RBP12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 KLF11O14901 512 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 DLX3O60479 287 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 ELFN1P0C7U0 828 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 KITP10721 976 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 ZNF30P17039 623 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 TFEBP19484 476 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 KIR2DL1P43626 348 aaPredicted RBP12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 SUOXP51687 545 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 PFKPQ01813 784 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 STX3Q13277 289 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 TSNAXIP1Q2TAA8 658 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 TECRLQ5HYJ1 363 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 AGAP9Q5VTM2 703 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 ATG16L1Q676U5 607 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 ERAP2Q6P179 960 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 LIPIQ6XZB0 460 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 CERS6Q6ZMG9 384 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 NUDT18Q6ZVK8 323 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 TRIM42Q8IWZ5 723 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 SLC44A3Q8N4M1 653 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 CCT6BQ92526 530 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 PTERQ96BW5 349 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 MRPL57Q9BQC6 102 aaKnown RBP12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 CLPBQ9H078 707 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 MRPL46Q9H2W6 279 aaKnown RBP12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 ABCF3Q9NUQ8 709 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 SUN2Q9UH99 717 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 MCM8Q9UJA3 840 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 TSR3Q9UJK0 312 aaKnown RBP12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 IKZF3Q9UKT9 509 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 STARD13Q9Y3M8 1113 aa12.09□□□□□ -0.47
SPTBN1-203ENST00000389980 E5RI56 91 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 NARSO43776 548 aaKnown RBP12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 SNNO75324 88 aaPredicted RBP12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 MTX2O75431 263 aa12.08□□□□□ -0.48
SPTBN1-203ENST00000389980 EGFP01133 1207 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms