RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 POU5F1BQ06416 359 aa14.58□□□□□ -0.07
VPS9D1-201ENST00000389386 TOP3AQ13472 1001 aaPredicted RBP14.58□□□□□ -0.07
VPS9D1-201ENST00000389386 TRIM71Q2Q1W2 868 aaKnown RBP14.58□□□□□ -0.07
VPS9D1-201ENST00000389386 ZNF667Q5HYK9 610 aa14.58□□□□□ -0.07
VPS9D1-201ENST00000389386 CERCAMQ5T4B2 595 aa14.58□□□□□ -0.07
VPS9D1-201ENST00000389386 CCBE1Q6UXH8 406 aaPredicted RBP14.58□□□□□ -0.07
VPS9D1-201ENST00000389386 BEND5Q7L4P6 421 aa14.58□□□□□ -0.07
VPS9D1-201ENST00000389386 CEP97Q8IW35 865 aa14.58□□□□□ -0.07
VPS9D1-201ENST00000389386 CLEC4FQ8N1N0 589 aa14.58□□□□□ -0.07
VPS9D1-201ENST00000389386 HEXIM2Q96MH2 286 aaKnown RBP14.58□□□□□ -0.07
VPS9D1-201ENST00000389386 MRPL57Q9BQC6 102 aaKnown RBP14.58□□□□□ -0.07
VPS9D1-201ENST00000389386 EML4Q9HC35 981 aaKnown RBP14.58□□□□□ -0.07
VPS9D1-201ENST00000389386 MOSPD1Q9UJG1 213 aa14.58□□□□□ -0.07
VPS9D1-201ENST00000389386 PCDHGB1Q9Y5G3 927 aa14.58□□□□□ -0.07
VPS9D1-201ENST00000389386 ZBBXA8MT70 800 aa14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 ANGPT2O15123 496 aa14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 NDST3O95803 873 aa14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 IQCF3P0C7M6 154 aa14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 MAGP20916 626 aa14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 RGS7P49802 495 aa14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 ATXN1P54253 815 aaKnown RBP14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 CCNA1P78396 465 aa14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 ACOX1Q15067 660 aa14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 CRY1Q16526 586 aa14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 CELF3Q5SZQ8 465 aaKnown RBP14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 GDPD3Q7L5L3 318 aa14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 RBM23Q86U06 439 aaKnown RBP14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 STK32CQ86UX6 486 aa14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 GRAMD2AQ8IUY3 354 aa14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 SLC22A15Q8IZD6 547 aa14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 FAM83FQ8NEG4 500 aaPredicted RBP14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 TMBIM1Q969X1 311 aa14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 SDCCAG3Q96C92 435 aa14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 RNF145Q96MT1 663 aa14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 ASPSCR1Q9BZE9 553 aa14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 CCDC90BQ9GZT6 254 aa14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 MIR1-1HGQ9H1L0 117 aa14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 SMOC2Q9H3U7 446 aa14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 CASS4Q9NQ75 786 aa14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 V9GYQ6 96 aa14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 MN1Q10571 1320 aaPredicted RBP14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 SIP14410 1827 aa14.58□□□□□ -0.08
VPS9D1-201ENST00000389386 PABPN1LA6NDY0 278 aaKnown RBP14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 SLC1A7O00341 560 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 MFSD11O43934 449 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 PRSS23O95084 383 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 AHSGP02765 367 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 GOT1P17174 413 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 KCNA5P22460 613 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 BDNFP23560 247 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 GLUD2P49448 558 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 RAB10P61026 200 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 P2RY8Q86VZ1 359 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 DNAAF3Q8N9W5 541 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 C3orf30Q96M34 536 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 MBOAT4Q96T53 435 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 PTPN18Q99952 460 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 TMEM246Q9BRR3 403 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 AMBRA1Q9C0C7 1298 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 ALG2Q9H553 416 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 TMEM134Q9H6X4 195 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 ANKHQ9HCJ1 492 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 CYP4F12Q9HCS2 524 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 OSGIN1Q9UJX0 560 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 USP3Q9Y6I4 520 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 C9JVG2 144 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 PFKMP08237 780 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 FSHRP23945 695 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 SOX11P35716 441 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 TPD52P55327 224 aaPredicted RBP14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 TUBA1BP68363 451 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 LIPEQ05469 1076 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 KIF19Q2TAC6 998 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 RABL3Q5HYI8 236 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 EFCAB12Q6NXP0 572 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 TUBA3EQ6PEY2 450 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 TUBA1AQ71U36 451 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 PSTKQ8IV42 348 aaKnown RBP14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 MFSD6LQ8IWD5 586 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 NATD1Q8N6N6 113 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 MCFD2Q8NI22 146 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 RORBQ92753 470 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 DHRS9Q9BPW9 319 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 KCTD14Q9BQ13 255 aaPredicted RBP14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 MRPL4Q9BYD3 311 aaKnown RBP14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 IRF2BPLQ9H1B7 796 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 CPSF3Q9UKF6 684 aaKnown RBP14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 BOLA1Q9Y3E2 137 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 LOC285556D6RIA3 1793 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 MGAMO43451 1857 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 SYCE1LA8MT33 242 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 TBC1D4O60343 1298 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 AP2A1O95782 977 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 TNNC2P02585 160 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 TGFB3P10600 412 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 HOXD10P28358 340 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 PIGAP37287 484 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 MRPS15P82914 257 aaKnown RBP14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 FOXM1Q08050 763 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 SURF1Q15526 300 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms