RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ARL15Q9NXU5 204 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 MARCH2Q9P0N8 246 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 CACNG4Q9UBN1 327 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 UBA2Q9UBT2 640 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 NUMBLQ9Y6R0 609 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 G3V2L1 256 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 MATN3O15232 486 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 PGLSO95336 258 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 GGT5P36269 586 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 MAGEA8P43361 318 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 COPZ1P61923 177 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 CDH18Q13634 790 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 MED22Q15528 200 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 MEP1AQ16819 746 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 CTXN3Q4LDR2 81 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 DGKKQ5KSL6 1271 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 PGM2L1Q6PCE3 622 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 CARNMT1Q8N4J0 409 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 SLC39A8Q9C0K1 460 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 PDP1Q9P0J1 537 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 MTRRQ9UBK8 725 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 EIF2B4Q9UI10 523 aaKnown RBP13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 ZNF99A8MXY4 864 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 PSMD11O00231 422 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 MYCP01106 439 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 SPATA31D3P0C874 917 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 SLC26A3P40879 764 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 BRCC3P46736 316 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 SYT16Q17RD7 645 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 SPATA31D4Q6ZUB0 917 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 ANKRD46Q86W74 232 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 TOP6BLQ8N6T0 577 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 TRIM63Q969Q1 353 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 PCED1BQ96HM7 432 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 OLFM1Q99784 485 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 FAM126AQ9BYI3 521 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 FAIMQ9NVQ4 179 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 HNRNPCL2B2RXH8 293 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 LOC110117498-PIK3R3F6TDL0 507 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 RFXANKO14593 260 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 VILLO15195 856 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 ARIH2O95376 493 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 SLC35E2BP0CK96 405 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 COX7A2P14406 83 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 KPNA1P52294 538 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 HERVK_113P63132 956 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 C1DQ13901 141 aaKnown RBP13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 BOP1Q14137 746 aaKnown RBP13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 TBC1D25Q3MII6 688 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 CEP78Q5JTW2 689 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 ERVK-6Q9BXR3 956 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 OGDHLQ9ULD0 1010 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 CEPT1Q9Y6K0 416 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 IRS2Q9Y4H2 1338 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 PKD1L3Q7Z443 1732 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 CCDC162PA2VCL2 907 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 FAM72CH0Y354 149 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 CYP7B1O75881 506 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 OTCP00480 354 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 GOT2P00505 430 aaKnown RBP13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 CAPN1P07384 714 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 RAP2AP10114 183 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 PRKACGP22612 351 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 CPT1AP50416 773 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 CRY1Q16526 586 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 FAM72AQ5TYM5 149 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 FAM72DQ6L9T8 149 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 PPP4R4Q6NUP7 873 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 DET1Q7L5Y6 550 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 FAM72BQ86X60 149 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 SCAIQ8N9R8 606 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 GPR152Q8TDT2 470 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 CDK15Q96Q40 435 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 LRRC3Q9BY71 257 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 PTGDR2Q9Y5Y4 395 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 TULP3O75386 442 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 C22orf31O95567 290 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 DGKQP52824 942 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 DIO3P55073 304 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 BEX3Q00994 111 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 PMS2P3Q13401 168 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 RFTN1Q14699 578 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 MFSD10Q14728 455 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 TRIQKQ629K1 86 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 STEAP4Q687X5 459 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 NIPAL1Q6NVV3 410 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 TTC23LQ6PF05 361 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 TXNDC11Q6PKC3 985 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 R3HCC1LQ7Z5L2 792 aaKnown RBP13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 GPR180Q86V85 440 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 CEP97Q8IW35 865 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 OR10Q1Q8NGQ4 319 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 KBTBD7Q8WVZ9 684 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 BIRC7Q96CA5 298 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 PANX1Q96RD7 426 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 CHCHD6Q9BRQ6 235 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 WBP11Q9Y2W2 641 aaKnown RBP13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 DERAQ9Y315 318 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 PHRF1Q9P1Y6 1649 aaKnown RBP13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 GRID2O43424 1007 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms