RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 APOLD1Q96LR9 279 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 TSSK3Q96PN8 268 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 A0A1W2PQ45 241 aaPredicted RBP14.78□□□□□ -0.04
LRRK1-201ENST00000388948 A0A1W2PQY0 241 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 TMCC2O75069 709 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 UBOX5O94941 541 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 MT-CYBP00156 380 aaPredicted RBP14.78□□□□□ -0.04
LRRK1-201ENST00000388948 ALADP13716 330 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 LDLRAP1Q5SW96 308 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 PLEKHA7Q6IQ23 1121 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 SLC30A9Q6PML9 568 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 KCTD15Q96SI1 283 aaPredicted RBP14.78□□□□□ -0.04
LRRK1-201ENST00000388948 PRDM8Q9NQV8 689 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 INTS10Q9NVR2 710 aaKnown RBP14.78□□□□□ -0.04
LRRK1-201ENST00000388948 ZNF37AP17032 561 aaPredicted RBP14.78□□□□□ -0.04
LRRK1-201ENST00000388948 DDX6P26196 483 aaKnown RBP eCLIP14.78□□□□□ -0.04
LRRK1-201ENST00000388948 WDR45BQ5MNZ6 344 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 KCT2Q8NC54 265 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 VANGL1Q8TAA9 524 aaPredicted RBP14.78□□□□□ -0.04
LRRK1-201ENST00000388948 FAM81AQ8TBF8 368 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 ZNF296Q8WUU4 475 aaPredicted RBP14.78□□□□□ -0.04
LRRK1-201ENST00000388948 ZHX1-C8orf76Q96EF9 292 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 MFHAS1Q9Y4C4 1052 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 CSKP41240 450 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 TAS2R40P59535 323 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 SEMG2Q02383 582 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 MLIPQ5VWP3 458 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 OAFQ86UD1 273 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 DDHD1Q8NEL9 900 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 PIWIL2Q8TC59 973 aaKnown RBP14.78□□□□□ -0.04
LRRK1-201ENST00000388948 SNX15Q9NRS6 342 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 COL20A1Q9P218 1284 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 IKZF3Q9UKT9 509 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 DMTF1Q9Y222 760 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 MRPS7Q9Y2R9 242 aaKnown RBP14.78□□□□□ -0.04
LRRK1-201ENST00000388948 B3GALT2O43825 422 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 KERAO60938 352 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 NYAP1Q6ZVC0 841 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 XYLT1Q86Y38 959 aa14.78□□□□□ -0.04
LRRK1-201ENST00000388948 KIAA1143Q96AT1 154 aaPredicted RBP14.78□□□□□ -0.04
LRRK1-201ENST00000388948 MRPS30Q9NP92 439 aaKnown RBP14.78□□□□□ -0.04
LRRK1-201ENST00000388948 ARHGEF28Q8N1W1 1705 aaKnown RBP14.78□□□□□ -0.04
LRRK1-201ENST00000388948 RFTN2Q52LD8 501 aaPredicted RBP14.77□□□□□ -0.04
LRRK1-201ENST00000388948 MED27Q6P2C8 311 aa14.77□□□□□ -0.04
LRRK1-201ENST00000388948 AADATQ8N5Z0 425 aa14.77□□□□□ -0.04
LRRK1-201ENST00000388948 Q8N9G6 341 aaPredicted RBP14.77□□□□□ -0.04
LRRK1-201ENST00000388948 CAVIN3Q969G5 261 aa14.77□□□□□ -0.04
LRRK1-201ENST00000388948 OR2AG1Q9H205 316 aa14.77□□□□□ -0.04
LRRK1-201ENST00000388948 PNO1Q9NRX1 252 aaKnown RBP14.77□□□□□ -0.04
LRRK1-201ENST00000388948 CNOT6Q9ULM6 557 aaKnown RBP14.77□□□□□ -0.04
LRRK1-201ENST00000388948 L1RE1Q9UN81 338 aa14.77□□□□□ -0.04
LRRK1-201ENST00000388948 MFSD11O43934 449 aa14.77□□□□□ -0.04
LRRK1-201ENST00000388948 UGT2B17O75795 530 aa14.77□□□□□ -0.04
LRRK1-201ENST00000388948 PIAS1O75925 651 aa14.77□□□□□ -0.04
LRRK1-201ENST00000388948 MFN2O95140 757 aa14.77□□□□□ -0.04
LRRK1-201ENST00000388948 ZNF8P17098 575 aaPredicted RBP14.77□□□□□ -0.04
LRRK1-201ENST00000388948 RYKP34925 604 aa14.77□□□□□ -0.04
LRRK1-201ENST00000388948 HTR7P34969 479 aa14.77□□□□□ -0.04
LRRK1-201ENST00000388948 GRIA3P42263 894 aa14.77□□□□□ -0.04
LRRK1-201ENST00000388948 USP46P62068 366 aa14.77□□□□□ -0.04
LRRK1-201ENST00000388948 NFATC2Q13469 925 aa14.77□□□□□ -0.04
LRRK1-201ENST00000388948 TAC4Q86UU9 113 aa14.77□□□□□ -0.04
LRRK1-201ENST00000388948 ZMIZ2Q8NF64 920 aa14.77□□□□□ -0.04
LRRK1-201ENST00000388948 BPIFB1Q8TDL5 484 aa14.77□□□□□ -0.04
LRRK1-201ENST00000388948 LDAHQ9H6V9 325 aa14.77□□□□□ -0.04
LRRK1-201ENST00000388948 STK16O75716 305 aa14.77□□□□□ -0.04
LRRK1-201ENST00000388948 CLPTM1O96005 669 aa14.77□□□□□ -0.04
LRRK1-201ENST00000388948 MRPS35P82673 323 aaKnown RBP14.77□□□□□ -0.04
LRRK1-201ENST00000388948 RNASEH2BQ5TBB1 312 aaKnown RBP14.77□□□□□ -0.04
LRRK1-201ENST00000388948 ZNF483Q8TF39 744 aaPredicted RBP14.77□□□□□ -0.04
LRRK1-201ENST00000388948 MIOSQ9NXC5 875 aa14.77□□□□□ -0.04
LRRK1-201ENST00000388948 YIPF1Q9Y548 306 aa14.77□□□□□ -0.04
LRRK1-201ENST00000388948 LOC100506127A0A0U1RQW1 187 aa14.77□□□□□ -0.05
LRRK1-201ENST00000388948 ZFP1Q6P2D0 407 aa14.77□□□□□ -0.05
LRRK1-201ENST00000388948 ZNF730Q6ZMV8 503 aa14.77□□□□□ -0.05
LRRK1-201ENST00000388948 SERPINA9Q86WD7 417 aa14.77□□□□□ -0.05
LRRK1-201ENST00000388948 RASGEF1AQ8N9B8 481 aa14.77□□□□□ -0.05
LRRK1-201ENST00000388948 CAB39LQ9H9S4 337 aa14.77□□□□□ -0.05
LRRK1-201ENST00000388948 ADGRB2O60241 1585 aa14.77□□□□□ -0.05
LRRK1-201ENST00000388948 PPIBP23284 216 aaKnown RBP14.77□□□□□ -0.05
LRRK1-201ENST00000388948 LMO2P25791 158 aa14.77□□□□□ -0.05
LRRK1-201ENST00000388948 LDB1Q86U70 411 aaPredicted RBP14.77□□□□□ -0.05
LRRK1-201ENST00000388948 BHLHE22Q8NFJ8 381 aaPredicted RBP14.77□□□□□ -0.05
LRRK1-201ENST00000388948 LMX1AQ8TE12 382 aa14.77□□□□□ -0.05
LRRK1-201ENST00000388948 CLCC1Q96S66 551 aa14.77□□□□□ -0.05
LRRK1-201ENST00000388948 HNRNPABQ99729 332 aaKnown RBP14.77□□□□□ -0.05
LRRK1-201ENST00000388948 SNX10Q9Y5X0 201 aa14.77□□□□□ -0.05
LRRK1-201ENST00000388948 SUV39H1O43463 412 aa14.77□□□□□ -0.05
LRRK1-201ENST00000388948 ACP5P13686 325 aa14.77□□□□□ -0.05
LRRK1-201ENST00000388948 MBLAC2Q68D91 279 aa14.77□□□□□ -0.05
LRRK1-201ENST00000388948 EEF1AKMT1Q8WVE0 214 aa14.77□□□□□ -0.05
LRRK1-201ENST00000388948 OGDHLQ9ULD0 1010 aa14.77□□□□□ -0.05
LRRK1-201ENST00000388948 ARHGAP36Q6ZRI8 547 aa14.76□□□□□ -0.05
LRRK1-201ENST00000388948 LPCAT2Q7L5N7 544 aa14.76□□□□□ -0.05
LRRK1-201ENST00000388948 PSMG2Q969U7 264 aa14.76□□□□□ -0.05
LRRK1-201ENST00000388948 GPR21Q99679 349 aa14.76□□□□□ -0.05
LRRK1-201ENST00000388948 BTBD10Q9BSF8 475 aa14.76□□□□□ -0.05
LRRK1-201ENST00000388948 PCBD2Q9H0N5 130 aa14.76□□□□□ -0.05
LRRK1-201ENST00000388948 GKN1Q9NS71 199 aa14.76□□□□□ -0.05
LRRK1-201ENST00000388948 TRPS1Q9UHF7 1281 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms