RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 KDM1BQ8NB78 822 aa8.46□□□□□ -1.05
NHLRC3-201ENST00000379599 CHDHQ8NE62 594 aaPredicted RBP8.46□□□□□ -1.05
NHLRC3-201ENST00000379599 ZNF555Q8NEP9 628 aa8.46□□□□□ -1.05
NHLRC3-201ENST00000379599 TRPV3Q8NET8 790 aa8.46□□□□□ -1.05
NHLRC3-201ENST00000379599 MCOLN3Q8TDD5 553 aa8.46□□□□□ -1.05
NHLRC3-201ENST00000379599 TMCO6Q96DC7 493 aa8.46□□□□□ -1.05
NHLRC3-201ENST00000379599 FAM129BQ96TA1 746 aa8.46□□□□□ -1.05
NHLRC3-201ENST00000379599 FAM126AQ9BYI3 521 aaPredicted RBP8.46□□□□□ -1.05
NHLRC3-201ENST00000379599 RSAD1Q9HA92 442 aa8.46□□□□□ -1.05
NHLRC3-201ENST00000379599 ANKHQ9HCJ1 492 aa8.46□□□□□ -1.05
NHLRC3-201ENST00000379599 MRPL47Q9HD33 250 aaKnown RBP8.46□□□□□ -1.05
NHLRC3-201ENST00000379599 COL20A1Q9P218 1284 aa8.46□□□□□ -1.05
NHLRC3-201ENST00000379599 ERVK-18Q9QC07 812 aa8.46□□□□□ -1.05
NHLRC3-201ENST00000379599 GTF2IRD1Q9UHL9 959 aa8.46□□□□□ -1.05
NHLRC3-201ENST00000379599 OSGIN1Q9UJX0 560 aa8.46□□□□□ -1.05
NHLRC3-201ENST00000379599 BAIAP2Q9UQB8 552 aa8.46□□□□□ -1.05
NHLRC3-201ENST00000379599 SLC45A1Q9Y2W3 748 aa8.46□□□□□ -1.05
NHLRC3-201ENST00000379599 AKAP11Q9UKA4 1901 aa8.46□□□□□ -1.05
NHLRC3-201ENST00000379599 FRMPD2Q68DX3 1309 aaPredicted RBP8.46□□□□□ -1.05
NHLRC3-201ENST00000379599 ANKRD36CQ5JPF3 1778 aa8.46□□□□□ -1.05
NHLRC3-201ENST00000379599 SLC12A8A0AV02 714 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 METTL15A6NJ78 407 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 LRIG2O94898 1065 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 FTH1P02794 183 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 CDK1P06493 297 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 APRTP07741 180 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 THRBP10828 461 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 ATF3P18847 181 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 TFEBP19484 476 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 MYL9P24844 172 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 PRKAR1BP31321 381 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 KCNC1P48547 511 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 CYP4F2P78329 520 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 CYP4F3Q08477 520 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 PUDPQ08623 228 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 LTB4RQ15722 352 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 STXBP2Q15833 593 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 BMT2Q1RMZ1 405 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 SMTNL2Q2TAL5 461 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 SPATS1Q496A3 300 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 FAM35AQ86V20 835 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 KRT73Q86Y46 540 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 TIGD4Q8IY51 512 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 UNC5BQ8IZJ1 945 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 CAMKK1Q8N5S9 505 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 ZNF565Q8N9K5 539 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 USP7Q93009 1102 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 BCL7BQ9BQE9 202 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 FEM1AQ9BSK4 669 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 FAM83DQ9H4H8 585 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 RAPGEFL1Q9UHV5 662 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 TINAGQ9UJW2 476 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 FZD1Q9UP38 647 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 MAGED1Q9Y5V3 778 aaPredicted RBP8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 LOC100506127A0A0U1RQW1 187 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 SH3D21A4FU49 640 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 KPNA7A9QM74 516 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 PPEF1O14829 653 aaPredicted RBP8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 MAFO75444 373 aaPredicted RBP8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 ALDOAP04075 364 aaKnown RBP8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 TRAPPC2P0DI81 140 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 TRAPPC2BP0DI82 140 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 FCGR1AP12314 374 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 ZNF30P17039 623 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 PRKCHP24723 683 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 DNAJB1P25685 340 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 RAP1GAPP47736 663 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 SSTP61278 116 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 CD47Q08722 323 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 FASTKQ14296 549 aaKnown RBP8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 DDR2Q16832 855 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 SYT16Q17RD7 645 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 ARMCX4Q5H9R4 360 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 MPP7Q5T2T1 576 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 LRFN4Q6PJG9 635 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 ZMIZ2Q8NF64 920 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 UFD1Q92890 307 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 CDCA5Q96FF9 252 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 SCYL1Q96KG9 808 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 TTPALQ9BTX7 342 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 GGA1Q9UJY5 639 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 MKLN1Q9UL63 735 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 RAB23Q9ULC3 237 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 NRCAMQ92823 1304 aa8.46□□□□□ -1.06
NHLRC3-201ENST00000379599 FAM92AA1XBS5 289 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 F8VP50 259 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 H3BQ06 376 aaPredicted RBP8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 SLC22A2O15244 555 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 DFNA5O60443 496 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 TRIM13O60858 407 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 RHOBTB1O94844 696 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 MYCLP12524 364 aaPredicted RBP8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 IL1R2P27930 398 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 BRCC3P46736 316 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 HOXA1P49639 335 aaPredicted RBP8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 CPT1AP50416 773 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 GBX2P52951 348 aaPredicted RBP8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 RAB14P61106 215 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 ABATP80404 500 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 TRIP4Q15650 581 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms