RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 LRRC61Q9BV99 259 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 ZCCHC2Q9C0B9 1178 aaKnown RBP13.12□□□□□ -0.31
CKAP2-202ENST00000378034 ASB8Q9H765 288 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 CARS2Q9HA77 564 aaKnown RBP13.12□□□□□ -0.31
CKAP2-202ENST00000378034 MRPL40Q9NQ50 206 aaKnown RBP13.12□□□□□ -0.31
CKAP2-202ENST00000378034 UCKL1Q9NWZ5 548 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 NLGN3Q9NZ94 848 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 MOSPD1Q9UJG1 213 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 PCOLCE2Q9UKZ9 415 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 SUFUQ9UMX1 484 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 TMEM98Q9Y2Y6 226 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 OAS3Q9Y6K5 1087 aaKnown RBP13.12□□□□□ -0.31
CKAP2-202ENST00000378034 SLC30A1Q9Y6M5 507 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 CABIN1Q9Y6J0 2220 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 TDRD6O60522 2096 aaKnown RBP13.11□□□□□ -0.31
CKAP2-202ENST00000378034 LMO7DNF2Z398 122 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 NUAK1O60285 661 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 CBFA2T3O75081 653 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 CEACAM1P13688 526 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 TERF1P54274 439 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 TMPRSS15P98073 1019 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 C2orf54Q08AI8 447 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 PEX6Q13608 980 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 MORF4L2Q15014 288 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 KCTD19Q17RG1 926 aaPredicted RBP13.11□□□□□ -0.31
CKAP2-202ENST00000378034 IZUMO3Q5VZ72 239 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 DOK6Q6PKX4 331 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 GKN2Q86XP6 184 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 GALNT13Q8IUC8 556 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 BBOF1Q8ND07 529 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 OR4C6Q8NH72 309 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 BAHD1Q8TBE0 780 aaPredicted RBP13.11□□□□□ -0.31
CKAP2-202ENST00000378034 HEXDCQ8WVB3 486 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 SCG3Q8WXD2 468 aaKnown RBP13.11□□□□□ -0.31
CKAP2-202ENST00000378034 SNF8Q96H20 258 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 SGSM3Q96HU1 749 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 SERPINB12Q96P63 405 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 KIFC1Q9BW19 673 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 TCEAL2Q9H3H9 227 aaPredicted RBP13.11□□□□□ -0.31
CKAP2-202ENST00000378034 TMPRSS11EQ9UL52 423 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 SDR42E2A6NKP2 422 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 UGT1A9O60656 530 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 DNAJC6O75061 913 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 FUCA1P04066 466 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 UGT1A6P19224 532 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 UGT1A1P22309 533 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 UGT1A4P22310 534 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 MGAT1P26572 445 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 MC4RP32245 332 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 UGT1A3P35503 534 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 UGT1A5P35504 534 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 MAGEA3P43357 314 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 GNPDA1P46926 289 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 ID4P47928 161 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 POLD2P49005 469 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 CACNG1Q06432 222 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 LRP8Q14114 963 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 PYCR3Q53H96 274 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 ADGRG6Q86SQ4 1221 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 OR13J1Q8NGT2 312 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 GDAP1Q8TB36 358 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 OR2M4Q96R27 311 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 ERP44Q9BS26 406 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 TRIM51Q9BSJ1 452 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 UGT1A7Q9HAW7 530 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 UGT1A10Q9HAW8 530 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 UGT1A8Q9HAW9 530 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 CHRAC1Q9NRG0 131 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 ATXN10Q9UBB4 475 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 SOX13Q9UN79 622 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 BTBD3Q9Y2F9 522 aa13.11□□□□□ -0.31
CKAP2-202ENST00000378034 CEP250Q9BV73 2442 aa13.1□□□□□ -0.31
CKAP2-202ENST00000378034 PLXNB3Q9ULL4 1909 aa13.1□□□□□ -0.31
CKAP2-202ENST00000378034 EFCAB8A8MWE9 144 aa13.1□□□□□ -0.31
CKAP2-202ENST00000378034 CHUKO15111 745 aa13.1□□□□□ -0.31
CKAP2-202ENST00000378034 ANXA6P08133 673 aa13.1□□□□□ -0.31
CKAP2-202ENST00000378034 TMEM115Q12893 351 aaPredicted RBP13.1□□□□□ -0.31
CKAP2-202ENST00000378034 ILF3Q12906 894 aaKnown RBP eCLIP13.1□□□□□ -0.31
CKAP2-202ENST00000378034 GTF2H3Q13889 308 aa13.1□□□□□ -0.31
CKAP2-202ENST00000378034 GPRC6AQ5T6X5 926 aa13.1□□□□□ -0.31
CKAP2-202ENST00000378034 KCTD16Q68DU8 428 aa13.1□□□□□ -0.31
CKAP2-202ENST00000378034 GLRX5Q86SX6 157 aa13.1□□□□□ -0.31
CKAP2-202ENST00000378034 EID2Q8N6I1 236 aa13.1□□□□□ -0.31
CKAP2-202ENST00000378034 FAM181AQ8N9Y4 354 aa13.1□□□□□ -0.31
CKAP2-202ENST00000378034 GPBAR1Q8TDU6 330 aa13.1□□□□□ -0.31
CKAP2-202ENST00000378034 TTC25Q96NG3 672 aa13.1□□□□□ -0.31
CKAP2-202ENST00000378034 GSDMCQ9BYG8 508 aa13.1□□□□□ -0.31
CKAP2-202ENST00000378034 CLPBQ9H078 707 aa13.1□□□□□ -0.31
CKAP2-202ENST00000378034 TMEM168Q9H0V1 697 aa13.1□□□□□ -0.31
CKAP2-202ENST00000378034 OR2AG1Q9H205 316 aa13.1□□□□□ -0.31
CKAP2-202ENST00000378034 SYBUQ9NX95 663 aa13.1□□□□□ -0.31
CKAP2-202ENST00000378034 NCKIPSDQ9NZQ3 722 aa13.1□□□□□ -0.31
CKAP2-202ENST00000378034 SAMD15Q9P1V8 674 aa13.1□□□□□ -0.31
CKAP2-202ENST00000378034 CRLS1Q9UJA2 301 aa13.1□□□□□ -0.31
CKAP2-202ENST00000378034 DOLKQ9UPQ8 538 aa13.1□□□□□ -0.31
CKAP2-202ENST00000378034 TRBV5-4A0A0C4DH59 114 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 GOLGA8MH3BSY2 632 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 YY2O15391 372 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 GRID2O43424 1007 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 RAD51CO43502 376 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms