RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	STYX	Q8WUJ0	223 aa		11.63	□□□□□ -0.55
LMO7-204	ENST00000377499	VMP1	Q96GC9	406 aa		11.63	□□□□□ -0.55
LMO7-204	ENST00000377499	MTG2	Q9H4K7	406 aa		11.63	□□□□□ -0.55
LMO7-204	ENST00000377499	LIN28A	Q9H9Z2	209 aa	Known RBP	11.63	□□□□□ -0.55
LMO7-204	ENST00000377499	GPAM	Q9HCL2	828 aa		11.63	□□□□□ -0.55
LMO7-204	ENST00000377499	SSU72	Q9NP77	194 aa	Known RBP	11.63	□□□□□ -0.55
LMO7-204	ENST00000377499	MARCH4	Q9P2E8	410 aa	Predicted RBP	11.63	□□□□□ -0.55
LMO7-204	ENST00000377499	GPSM3	Q9Y4H4	160 aa		11.63	□□□□□ -0.55
LMO7-204	ENST00000377499	WASF2	Q9Y6W5	498 aa		11.63	□□□□□ -0.55
LMO7-204	ENST00000377499	EPOP	A6NHQ4	379 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	PFDN6	O15212	129 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	LINC01565	O15544	149 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	LDB2	O43679	373 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	SRC	P12931	536 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	FMO4	P31512	558 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	MC4R	P32245	332 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	EPHA5	P54756	1037 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	GRM2	Q14416	872 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	STK11	Q15831	433 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	PDCD4	Q53EL6	469 aa	Known RBP	11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	DGKK	Q5KSL6	1271 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	ATAT1	Q5SQI0	421 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	SPNS2	Q8IVW8	549 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	GAB3	Q8WWW8	586 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	CDKN2AIPNL	Q96HQ2	116 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	PRPF18	Q99633	342 aa	Known RBP	11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	ZNF184	Q99676	751 aa	Predicted RBP	11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	ZDHHC4	Q9NPG8	344 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	ACSS2	Q9NR19	701 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	FAIM	Q9NVQ4	179 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	POLR3B	Q9NW08	1133 aa	Predicted RBP	11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	FAM50B	Q9Y247	325 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	KIAA1671	Q9BY89	1806 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	TBC1D3B	A6NDS4	549 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	HEPACAM2	A8MVW5	462 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	TSPAN9	O75954	239 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	CD160	O95971	181 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	MPO	P05164	745 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	ATP5B	P06576	529 aa	Known RBP	11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	ARSA	P15289	507 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	MLLT3	P42568	568 aa	Predicted RBP	11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	TAS2R39	P59534	338 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	STX3	Q13277	289 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	ZNF77	Q15935	545 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	RBM20	Q5T481	1227 aa	Known RBP	11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	B3GNT6	Q6ZMB0	384 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	LYSMD3	Q7Z3D4	306 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	CACUL1	Q86Y37	369 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	NPAS3	Q8IXF0	933 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	PLD6	Q8N2A8	252 aa	Known RBP	11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	OR13J1	Q8NGT2	312 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	ACMSD	Q8TDX5	336 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	PARVB	Q9HBI1	364 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	TREX1	Q9NSU2	369 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	CLDND1	Q9NY35	253 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	PCDHGA8	Q9Y5G5	932 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	OR51B4	Q9Y5P0	310 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	C5orf42	Q9H799	3197 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	SLC7A4	O43246	635 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	LMNA	P02545	664 aa	Known RBP	11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	CPA3	P15088	417 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	GLUL	P15104	373 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	ARNT	P27540	789 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	ARCN1	P48444	511 aa	Known RBP	11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	TUBA1B	P68363	451 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	PDAP1	Q13442	181 aa	Known RBP	11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	E2F2	Q14209	437 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	GEN1	Q17RS7	908 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	PRSS36	Q5K4E3	855 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	ASTL	Q6HA08	431 aa	Predicted RBP	11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	C22orf39	Q6P5X5	142 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	FAM151B	Q6UXP7	276 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	DPY19L3	Q6ZPD9	716 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	TUBA1A	Q71U36	451 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	KBTBD2	Q8IY47	623 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	CCNYL1	Q8N7R7	359 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	MDGA1	Q8NFP4	955 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	RAB3IL1	Q8TBN0	382 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	SMARCD2	Q92925	531 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	MRM3	Q9HC36	420 aa	Known RBP	11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	ZFP14	Q9HCL3	533 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	DEC1	Q9P2X7	70 aa		11.62	□□□□□ -0.55
LMO7-204	ENST00000377499	ANAPC1	Q9H1A4	1944 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	SRP72	O76094	671 aa	Known RBP	11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	RHOBTB1	O94844	696 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	RAB10	P61026	200 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	SLC12A1	Q13621	1099 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	ITGA9	Q13797	1035 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	TAF1A	Q15573	450 aa	Predicted RBP	11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	FNDC3B	Q53EP0	1204 aa	Known RBP	11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	GALNT4	Q8N4A0	578 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	PPP4R1	Q8TF05	950 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	ALG14	Q96F25	216 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	COQ7	Q99807	217 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	ABCG8	Q9H221	673 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	ZFYVE1	Q9HBF4	777 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	NMRAL1	Q9HBL8	299 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	TXLNG	Q9NUQ3	528 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms