RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 CFIP05156 583 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 BNC1Q01954 994 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 TPGS2Q68CL5 300 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 ALYREFQ86V81 257 aaKnown RBP13.55□□□□□ -0.24
GPC6-201ENST00000377047 PNPT1Q8TCS8 783 aaKnown RBP13.55□□□□□ -0.24
GPC6-201ENST00000377047 SLC47A1Q96FL8 570 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 ERVK-5Q9HDB9 667 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 R3HDM2Q9Y2K5 976 aaKnown RBP13.55□□□□□ -0.24
GPC6-201ENST00000377047 SAMHD1Q9Y3Z3 626 aaKnown RBP13.55□□□□□ -0.24
GPC6-201ENST00000377047 LOC100506127A0A0U1RQW1 187 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 OR1F1O43749 312 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 MED26O95402 600 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 RPIAP49247 311 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 DRG2P55039 364 aaKnown RBP13.55□□□□□ -0.24
GPC6-201ENST00000377047 LPIN1Q14693 890 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 SLC43A3Q8NBI5 491 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 Q96MT0 163 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 ACSS2Q9NR19 701 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 OGDHLQ9ULD0 1010 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 TCAF1Q9Y4C2 921 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 PCDHGB3Q9Y5G1 929 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.55□□□□□ -0.24
GPC6-201ENST00000377047 SUV39H1O43463 412 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 GOT2P00505 430 aaKnown RBP13.55□□□□□ -0.24
GPC6-201ENST00000377047 HNRNPH3P31942 346 aaKnown RBP13.55□□□□□ -0.24
GPC6-201ENST00000377047 CDKN2BP42772 138 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 IL10RBQ08334 325 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 C2orf80Q0P641 193 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 COL9A3Q14050 684 aaPredicted RBP13.55□□□□□ -0.24
GPC6-201ENST00000377047 ZSWIM7Q19AV6 140 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 NEK5Q6P3R8 708 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.55□□□□□ -0.24
GPC6-201ENST00000377047 ZNF567Q8N184 647 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 ATP6V1C2Q8NEY4 427 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 JSRP1Q96MG2 331 aaPredicted RBP13.55□□□□□ -0.24
GPC6-201ENST00000377047 LRTM1Q9HBL6 345 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 PARP4Q9UKK3 1724 aaKnown RBP13.55□□□□□ -0.24
GPC6-201ENST00000377047 PSMG1O95456 288 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 PPIBP23284 216 aaKnown RBP13.55□□□□□ -0.24
GPC6-201ENST00000377047 USP46P62068 366 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 NDUFAF6Q330K2 333 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 TMEM63BQ5T3F8 832 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 HEATR4Q86WZ0 1026 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 CAMK1DQ8IU85 385 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 SLC9A6Q92581 669 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 EXOSC8Q96B26 276 aaKnown RBP13.55□□□□□ -0.24
GPC6-201ENST00000377047 NXNL1Q96CM4 212 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 DCUN1D5Q9BTE7 237 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 TM7SF2O76062 418 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 DNAJB7Q7Z6W7 309 aaPredicted RBP13.54□□□□□ -0.24
GPC6-201ENST00000377047 C5orf34Q96MH7 638 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 DDX18Q9NVP1 670 aaKnown RBP13.54□□□□□ -0.24
GPC6-201ENST00000377047 CLDN4O14493 209 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 STK16O75716 305 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 SASH3O75995 380 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 MT-CYBP00156 380 aaPredicted RBP13.54□□□□□ -0.24
GPC6-201ENST00000377047 RAB30Q15771 203 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 ZNF662Q6ZS27 426 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 NPLOC4Q8TAT6 608 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 CLEC4CQ8WTT0 213 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 SRMSQ9H3Y6 488 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 APOBEC3GQ9HC16 384 aaKnown RBP13.54□□□□□ -0.24
GPC6-201ENST00000377047 SLC45A1Q9Y2W3 748 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 PLIN4Q96Q06 1357 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 GRIN2DO15399 1336 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 YJEFN3A6XGL0 299 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 CLDN9O95484 217 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 ASPAP45381 313 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 GNPDA1P46926 289 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 SEMG2Q02383 582 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 LAPTM5Q13571 262 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 FNIP1Q8TF40 1166 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 DNASE1L2Q92874 299 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 PTPN18Q99952 460 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 CDADC1Q9BWV3 514 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 FBXW2Q9UKT8 454 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 TEX28O15482 410 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 C2P06681 752 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 ALOX12P18054 663 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 MPSTP25325 297 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 HSPA7P48741 367 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 CCR3P51677 355 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 BNIP2Q12982 314 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 TIGD2Q4W5G0 525 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 FZD8Q9H461 694 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 FAM124BQ9H5Z6 455 aaPredicted RBP13.54□□□□□ -0.24
GPC6-201ENST00000377047 ALKBH4Q9NXW9 302 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 SLC17A7Q9P2U7 560 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 SPATA19Q7Z5L4 167 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 UNC5BQ8IZJ1 945 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 NOL11Q9H8H0 719 aaKnown RBP13.54□□□□□ -0.24
GPC6-201ENST00000377047 LRRC4CQ9HCJ2 640 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 MIOSQ9NXC5 875 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 PTGFRNQ9P2B2 879 aa13.54□□□□□ -0.24
GPC6-201ENST00000377047 ADSLP30566 484 aaPredicted RBP13.53□□□□□ -0.24
GPC6-201ENST00000377047 MAPK11Q15759 364 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 DGUOKQ16854 277 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 FBXO48Q5FWF7 155 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 MED27Q6P2C8 311 aa13.53□□□□□ -0.24
GPC6-201ENST00000377047 GPR88Q9GZN0 384 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms