RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 RHOBTB1O94844 696 aa13.14□□□□□ -0.31
ACTN1-202ENST00000376839 C1RP00736 705 aa13.14□□□□□ -0.31
ACTN1-202ENST00000376839 PRR35P0CG20 571 aa13.14□□□□□ -0.31
ACTN1-202ENST00000376839 FMO4P31512 558 aa13.14□□□□□ -0.31
ACTN1-202ENST00000376839 GRK4P32298 578 aa13.14□□□□□ -0.31
ACTN1-202ENST00000376839 CAPGP40121 348 aa13.14□□□□□ -0.31
ACTN1-202ENST00000376839 KCNK10P57789 538 aa13.14□□□□□ -0.31
ACTN1-202ENST00000376839 YWHAHQ04917 246 aaPredicted RBP13.14□□□□□ -0.31
ACTN1-202ENST00000376839 TUSC3Q13454 348 aa13.14□□□□□ -0.31
ACTN1-202ENST00000376839 RAB39AQ14964 217 aa13.14□□□□□ -0.31
ACTN1-202ENST00000376839 C16orf72Q14CZ0 275 aa13.14□□□□□ -0.31
ACTN1-202ENST00000376839 PLCL1Q15111 1095 aa13.14□□□□□ -0.31
ACTN1-202ENST00000376839 TIGD2Q4W5G0 525 aa13.14□□□□□ -0.31
ACTN1-202ENST00000376839 COQ5Q5HYK3 327 aa13.14□□□□□ -0.31
ACTN1-202ENST00000376839 GPR107Q5VW38 600 aa13.14□□□□□ -0.31
ACTN1-202ENST00000376839 TBPL2Q6SJ96 375 aa13.14□□□□□ -0.31
ACTN1-202ENST00000376839 CXCL17Q6UXB2 119 aa13.14□□□□□ -0.31
ACTN1-202ENST00000376839 TMEM26Q6ZUK4 368 aa13.14□□□□□ -0.31
ACTN1-202ENST00000376839 MIB1Q86YT6 1006 aa13.14□□□□□ -0.31
ACTN1-202ENST00000376839 DCBLD1Q8N8Z6 715 aa13.14□□□□□ -0.31
ACTN1-202ENST00000376839 OR2T11Q8NH01 316 aa13.14□□□□□ -0.31
ACTN1-202ENST00000376839 SUSD3Q96L08 255 aa13.14□□□□□ -0.31
ACTN1-202ENST00000376839 SEPHS2Q99611 448 aa13.14□□□□□ -0.31
ACTN1-202ENST00000376839 SEZ6LQ9BYH1 1024 aa13.14□□□□□ -0.31
ACTN1-202ENST00000376839 RPF2Q9H7B2 306 aaKnown RBP13.14□□□□□ -0.31
ACTN1-202ENST00000376839 POLR1BQ9H9Y6 1135 aa13.14□□□□□ -0.31
ACTN1-202ENST00000376839 SMPD3Q9NY59 655 aaPredicted RBP13.14□□□□□ -0.31
ACTN1-202ENST00000376839 ANAPC2Q9UJX6 822 aa13.14□□□□□ -0.31
ACTN1-202ENST00000376839 TDRD15B5MCY1 1934 aaKnown RBP13.14□□□□□ -0.31
ACTN1-202ENST00000376839 TRPM7Q96QT4 1865 aa13.14□□□□□ -0.31
ACTN1-202ENST00000376839 IGLV3-10A0A075B6K4 115 aa13.13□□□□□ -0.31
ACTN1-202ENST00000376839 NPEPPSL1A6NEC2 478 aa13.13□□□□□ -0.31
ACTN1-202ENST00000376839 H3BMQ9 156 aa13.13□□□□□ -0.31
ACTN1-202ENST00000376839 RAMP2O60895 175 aa13.13□□□□□ -0.31
ACTN1-202ENST00000376839 IL12AP29459 219 aa13.13□□□□□ -0.31
ACTN1-202ENST00000376839 RPS9P46781 194 aaKnown RBP13.13□□□□□ -0.31
ACTN1-202ENST00000376839 ANKS6Q68DC2 871 aa13.13□□□□□ -0.31
ACTN1-202ENST00000376839 OGFOD2Q6N063 350 aa13.13□□□□□ -0.31
ACTN1-202ENST00000376839 ABRAXAS1Q6UWZ7 409 aa13.13□□□□□ -0.31
ACTN1-202ENST00000376839 MON1AQ86VX9 555 aa13.13□□□□□ -0.31
ACTN1-202ENST00000376839 PTRH1Q86Y79 214 aaKnown RBP13.13□□□□□ -0.31
ACTN1-202ENST00000376839 BBS5Q8N3I7 341 aa13.13□□□□□ -0.31
ACTN1-202ENST00000376839 DHRSXQ8N5I4 330 aa13.13□□□□□ -0.31
ACTN1-202ENST00000376839 KLHDC9Q8NEP7 349 aa13.13□□□□□ -0.31
ACTN1-202ENST00000376839 LZICQ8WZA0 190 aa13.13□□□□□ -0.31
ACTN1-202ENST00000376839 COG8Q96MW5 612 aa13.13□□□□□ -0.31
ACTN1-202ENST00000376839 SMIM14Q96QK8 99 aa13.13□□□□□ -0.31
ACTN1-202ENST00000376839 HIPK3Q9H422 1215 aa13.13□□□□□ -0.31
ACTN1-202ENST00000376839 POPDC3Q9HBV1 291 aa13.13□□□□□ -0.31
ACTN1-202ENST00000376839 SCML2Q9UQR0 700 aa13.13□□□□□ -0.31
ACTN1-202ENST00000376839 FGF1P05230 155 aa13.13□□□□□ -0.31
ACTN1-202ENST00000376839 RPS17P08708 135 aaKnown RBP13.13□□□□□ -0.31
ACTN1-202ENST00000376839 HRH2P25021 359 aa13.13□□□□□ -0.31
ACTN1-202ENST00000376839 IL10RBQ08334 325 aa13.13□□□□□ -0.31
ACTN1-202ENST00000376839 MGAT3Q09327 533 aa13.13□□□□□ -0.31
ACTN1-202ENST00000376839 SERINC3Q13530 473 aa13.13□□□□□ -0.31
ACTN1-202ENST00000376839 PATL1Q86TB9 770 aaKnown RBP13.13□□□□□ -0.31
ACTN1-202ENST00000376839 STAG3L4Q8TBR4 150 aa13.13□□□□□ -0.31
ACTN1-202ENST00000376839 FUBP1Q96AE4 644 aaKnown RBP13.13□□□□□ -0.31
ACTN1-202ENST00000376839 POLR1EQ9GZS1 481 aaKnown RBP13.13□□□□□ -0.31
ACTN1-202ENST00000376839 TDRKHQ9Y2W6 561 aaKnown RBP13.13□□□□□ -0.31
ACTN1-202ENST00000376839 ASB1Q9Y576 335 aa13.13□□□□□ -0.31
ACTN1-202ENST00000376839 A0A1W2PPW3 197 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 CCDC154A6NI56 674 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 GPR182O15218 404 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 EEDO75530 441 aaKnown RBP13.12□□□□□ -0.31
ACTN1-202ENST00000376839 FCGR1AP12314 374 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 HLA-DPA1P20036 260 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 OGNP20774 298 aaKnown RBP13.12□□□□□ -0.31
ACTN1-202ENST00000376839 CD247P20963 164 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 TYSND1Q2T9J0 566 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 TTC9BQ8N6N2 239 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 BRSK1Q8TDC3 778 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 GFM2Q969S9 779 aaKnown RBP13.12□□□□□ -0.31
ACTN1-202ENST00000376839 CDKN2AIPNLQ96HQ2 116 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 VPS50Q96JG6 964 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 NSMCE3Q96MG7 304 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 ZNF599Q96NL3 588 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 RPRD1AQ96P16 312 aaPredicted RBP13.12□□□□□ -0.31
ACTN1-202ENST00000376839 CYP2S1Q96SQ9 504 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 DERL2Q9GZP9 239 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 PLGRKTQ9HBL7 147 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 CD320Q9NPF0 282 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 CDH7Q9ULB5 785 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 SPO11Q9Y5K1 396 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 ZNF701M0R085 212 aaPredicted RBP13.12□□□□□ -0.31
ACTN1-202ENST00000376839 GIPC1O14908 333 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 ZNF623O75123 536 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 SLC22A3O75751 556 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 HOXB8P17481 243 aaPredicted RBP13.12□□□□□ -0.31
ACTN1-202ENST00000376839 CDKN1CP49918 316 aaPredicted RBP13.12□□□□□ -0.31
ACTN1-202ENST00000376839 OR4D2P58180 307 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 ZNF235Q14590 738 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 NEDD8Q15843 81 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 XKR7Q5GH72 579 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 FGD3Q5JSP0 725 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 AARS2Q5JTZ9 985 aaKnown RBP13.12□□□□□ -0.31
ACTN1-202ENST00000376839 NANOGP8Q6NSW7 305 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 KCTD8Q6ZWB6 473 aa13.12□□□□□ -0.31
ACTN1-202ENST00000376839 SPATA19Q7Z5L4 167 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms