RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 SPATA16Q9BXB7 569 aa20.83■□□□□ 0.93
VSX1-201ENST00000376707 SARS2Q9NP81 518 aaKnown RBP20.83■□□□□ 0.93
VSX1-201ENST00000376707 PCDHGA4Q9Y5G9 962 aa20.83■□□□□ 0.93
VSX1-201ENST00000376707 PCDHGA3Q9Y5H0 932 aa20.83■□□□□ 0.93
VSX1-201ENST00000376707 CFAP46Q8IYW2 2715 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 AHCTF1Q8WYP5 2266 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 B8ZZF3 427 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 GRID2O43424 1007 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 ZIC2O95409 532 aaPredicted RBP20.82■□□□□ 0.92
VSX1-201ENST00000376707 SLC4A1P02730 911 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 PIRTP0C851 137 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 TNNT1P13805 278 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 SLC2A4P14672 509 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 ATP1A2P50993 1020 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 HADHBP55084 474 aaKnown RBP20.82■□□□□ 0.92
VSX1-201ENST00000376707 DYNLT1P63172 113 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 NFATC2Q13469 925 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 PCSK7Q16549 785 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 FAM182AQ5T1J6 154 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 ALS2CLQ60I27 953 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 IYDQ6PHW0 289 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 SLC9B2Q86UD5 537 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 FAM129CQ86XR2 697 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 RHOT1Q8IXI2 618 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 TC2NQ8N9U0 490 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 JPH3Q8WXH2 748 aaPredicted RBP20.82■□□□□ 0.92
VSX1-201ENST00000376707 SH3KBP1Q96B97 665 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 OLFM3Q96PB7 478 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 TRIB3Q96RU7 358 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 HERPUD2Q9BSE4 406 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 BRD8Q9H0E9 1235 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 SLC25A51Q9H1U9 297 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 CARD9Q9H257 536 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 SLC39A1Q9NY26 324 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 DDX56Q9NY93 547 aaKnown RBP20.82■□□□□ 0.92
VSX1-201ENST00000376707 SHOC2Q9UQ13 582 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 ZNF462Q96JM2 2506 aa20.82■□□□□ 0.92
VSX1-201ENST00000376707 J3QKU1 62 aa20.81■□□□□ 0.92
VSX1-201ENST00000376707 NUAK1O60285 661 aa20.81■□□□□ 0.92
VSX1-201ENST00000376707 SLC25A14O95258 325 aaPredicted RBP20.81■□□□□ 0.92
VSX1-201ENST00000376707 LCA5LO95447 670 aa20.81■□□□□ 0.92
VSX1-201ENST00000376707 ITGB2P05107 769 aa20.81■□□□□ 0.92
VSX1-201ENST00000376707 CDK18Q07002 472 aa20.81■□□□□ 0.92
VSX1-201ENST00000376707 SNAP47Q5SQN1 464 aa20.81■□□□□ 0.92
VSX1-201ENST00000376707 PHYKPLQ8IUZ5 450 aa20.81■□□□□ 0.92
VSX1-201ENST00000376707 EXTL1Q92935 676 aa20.81■□□□□ 0.92
VSX1-201ENST00000376707 PMEPA1Q969W9 287 aa20.81■□□□□ 0.92
VSX1-201ENST00000376707 EID2BQ96D98 161 aa20.81■□□□□ 0.92
VSX1-201ENST00000376707 ZSCAN5AQ9BUG6 496 aa20.81■□□□□ 0.92
VSX1-201ENST00000376707 DDA1Q9BW61 102 aa20.81■□□□□ 0.92
VSX1-201ENST00000376707 GPR63Q9BZJ6 419 aa20.81■□□□□ 0.92
VSX1-201ENST00000376707 TRIM5Q9C035 493 aa20.81■□□□□ 0.92
VSX1-201ENST00000376707 OR2AG1Q9H205 316 aa20.81■□□□□ 0.92
VSX1-201ENST00000376707 MAGEE1Q9HCI5 957 aa20.81■□□□□ 0.92
VSX1-201ENST00000376707 ARFGAP3Q9NP61 516 aa20.81■□□□□ 0.92
VSX1-201ENST00000376707 RAD18Q9NS91 495 aa20.81■□□□□ 0.92
VSX1-201ENST00000376707 ATXN10Q9UBB4 475 aa20.81■□□□□ 0.92
VSX1-201ENST00000376707 HELZ2Q9BYK8 2649 aaKnown RBP20.81■□□□□ 0.92
VSX1-201ENST00000376707 KIR2DS5A0A0G2JLQ3 304 aa20.8■□□□□ 0.92
VSX1-201ENST00000376707 A0A0G2JNG1 304 aa20.8■□□□□ 0.92
VSX1-201ENST00000376707 EFCAB7A8K855 629 aa20.8■□□□□ 0.92
VSX1-201ENST00000376707 KIR2DS3K7RE56 304 aa20.8■□□□□ 0.92
VSX1-201ENST00000376707 F3P13726 295 aa20.8■□□□□ 0.92
VSX1-201ENST00000376707 ZNF8P17098 575 aaPredicted RBP20.8■□□□□ 0.92
VSX1-201ENST00000376707 DCDC1P59894 354 aa20.8■□□□□ 0.92
VSX1-201ENST00000376707 KIR2DS5Q14953 304 aa20.8■□□□□ 0.92
VSX1-201ENST00000376707 TAZQ16635 292 aa20.8■□□□□ 0.92
VSX1-201ENST00000376707 LINC00303Q3SY05 128 aa20.8■□□□□ 0.92
VSX1-201ENST00000376707 CCDC70Q6NSX1 233 aa20.8■□□□□ 0.92
VSX1-201ENST00000376707 XKR5Q6UX68 686 aa20.8■□□□□ 0.92
VSX1-201ENST00000376707 B4GALNT4Q76KP1 1039 aa20.8■□□□□ 0.92
VSX1-201ENST00000376707 GPR26Q8NDV2 337 aa20.8■□□□□ 0.92
VSX1-201ENST00000376707 NCSTNQ92542 709 aa20.8■□□□□ 0.92
VSX1-201ENST00000376707 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.8■□□□□ 0.92
VSX1-201ENST00000376707 ASPSCR1Q9BZE9 553 aa20.8■□□□□ 0.92
VSX1-201ENST00000376707 OCIAD1Q9NX40 245 aa20.8■□□□□ 0.92
VSX1-201ENST00000376707 PDP2Q9P2J9 529 aa20.8■□□□□ 0.92
VSX1-201ENST00000376707 ZNF711Q9Y462 761 aa20.8■□□□□ 0.92
VSX1-201ENST00000376707 HYOU1Q9Y4L1 999 aa20.8■□□□□ 0.92
VSX1-201ENST00000376707 B3GALT1Q9Y5Z6 326 aa20.8■□□□□ 0.92
VSX1-201ENST00000376707 A6NCN8 305 aa20.79■□□□□ 0.92
VSX1-201ENST00000376707 OR5K4A6NMS3 321 aa20.79■□□□□ 0.92
VSX1-201ENST00000376707 A8MU76 341 aa20.79■□□□□ 0.92
VSX1-201ENST00000376707 B4E171 279 aa20.79■□□□□ 0.92
VSX1-201ENST00000376707 SPOPO43791 374 aa20.79■□□□□ 0.92
VSX1-201ENST00000376707 WT1P19544 449 aaPredicted RBP20.79■□□□□ 0.92
VSX1-201ENST00000376707 COMTP21964 271 aa20.79■□□□□ 0.92
VSX1-201ENST00000376707 TSPAN7P41732 249 aa20.79■□□□□ 0.92
VSX1-201ENST00000376707 MAPK9P45984 424 aa20.79■□□□□ 0.92
VSX1-201ENST00000376707 ARSDP51689 593 aa20.79■□□□□ 0.92
VSX1-201ENST00000376707 RAB15P59190 212 aa20.79■□□□□ 0.92
VSX1-201ENST00000376707 SLC14A2Q15849 920 aa20.79■□□□□ 0.92
VSX1-201ENST00000376707 ZNF648Q5T619 568 aaPredicted RBP20.79■□□□□ 0.92
VSX1-201ENST00000376707 DCAF12Q5T6F0 453 aa20.79■□□□□ 0.92
VSX1-201ENST00000376707 PDPK2PQ6A1A2 396 aa20.79■□□□□ 0.92
VSX1-201ENST00000376707 WDR74Q6RFH5 385 aaPredicted RBP20.79■□□□□ 0.92
VSX1-201ENST00000376707 TMC3Q7Z5M5 1100 aa20.79■□□□□ 0.92
VSX1-201ENST00000376707 TRAM1L1Q8N609 369 aa20.79■□□□□ 0.92
VSX1-201ENST00000376707 IL22RA1Q8N6P7 574 aa20.79■□□□□ 0.92
VSX1-201ENST00000376707 EXD3Q8N9H8 876 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms