RNA–Protein interactions for RNA: ENST00000376567.6

DDR1-224, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-224ENST00000376567 MSH3P20585 1137 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 CTNNB1P35222 781 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 CCNFP41002 786 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 GPR17Q13304 367 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 SERINC3Q13530 473 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 ACAP2Q15057 778 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 IL23RQ5VWK5 629 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 EPGNQ6UW88 154 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 FOPNLQ96NB1 174 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 WRAP53Q9BUR4 548 aaKnown RBP12.33□□□□□ -0.44
DDR1-224ENST00000376567 CCDC106Q9BWC9 280 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 YY1AP1Q9H869 796 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 PCDH12Q9NPG4 1184 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 G3V2L1 256 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 ALDH9A1P49189 494 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 PRKAA2P54646 552 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 MTPNP58546 118 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 SFT2D3Q587I9 215 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 TIFABQ6ZNK6 161 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 RD3Q7Z3Z2 195 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 SLC22A17Q8WUG5 538 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 TPD52L3Q96J77 140 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 SORT1Q99523 831 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 ATP13A3Q9H7F0 1226 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 CAPN10Q9HC96 672 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 ASAH2Q9NR71 780 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 NUP214P35658 2090 aaPredicted RBP12.33□□□□□ -0.44
DDR1-224ENST00000376567 EVPLLA8MZ36 301 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 PER2O15055 1255 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 ECI2O75521 394 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 PCDH8O95206 1070 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 HSPA1AP0DMV8 641 aaKnown RBP12.33□□□□□ -0.44
DDR1-224ENST00000376567 HSPA1BP0DMV9 641 aaKnown RBP12.33□□□□□ -0.44
DDR1-224ENST00000376567 CTGFP29279 349 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 RGRP47804 291 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 ARHGDIAP52565 204 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 C18orf21Q32NC0 220 aaPredicted RBP12.33□□□□□ -0.44
DDR1-224ENST00000376567 TRIM60Q495X7 471 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 ADGRF1Q5T601 910 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 PM20D1Q6GTS8 502 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 SNRNP27Q8WVK2 155 aaKnown RBP12.33□□□□□ -0.44
DDR1-224ENST00000376567 THAP11Q96EK4 314 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 HIC2Q96JB3 615 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 MAGEH1Q9H213 219 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 ALG2Q9H553 416 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 TLR9Q9NR96 1032 aa12.33□□□□□ -0.44
DDR1-224ENST00000376567 TTC36A6NLP5 189 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 TRAFD1O14545 582 aaPredicted RBP12.32□□□□□ -0.44
DDR1-224ENST00000376567 CLIC3O95833 236 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 CDH4P55283 916 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 IRX1P78414 480 aaPredicted RBP12.32□□□□□ -0.44
DDR1-224ENST00000376567 IRF8Q02556 426 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 RABL3Q5HYI8 236 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 PSAPL1Q6NUJ1 521 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 HJURPQ8NCD3 748 aaPredicted RBP12.32□□□□□ -0.44
DDR1-224ENST00000376567 CYB5D2Q8WUJ1 264 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 TMEM159Q96B96 161 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 CDK5RAP1Q96SZ6 601 aaKnown RBP12.32□□□□□ -0.44
DDR1-224ENST00000376567 ARMC7Q9H6L4 198 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 SPG21Q9NZD8 308 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 SCHIP1Q9P0W5 487 aaPredicted RBP12.32□□□□□ -0.44
DDR1-224ENST00000376567 A0A088AWK7 358 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 C15orf38-AP3S2A0A0A6YYH1 394 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 WDR47O94967 919 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 IL1BP01584 269 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 C8AP07357 584 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 COL6A2P12110 1019 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 NEK2P51955 445 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 GRB7Q14451 532 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 PLA2G4EQ3MJ16 856 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 WLSQ5T9L3 541 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 STEAP4Q687X5 459 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 FAM171BQ6P995 826 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 KIAA0408Q6ZU52 694 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 ARPINQ7Z6K5 226 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 RTN4RL1Q86UN2 441 aaPredicted RBP12.32□□□□□ -0.44
DDR1-224ENST00000376567 FAM47BQ8NA70 645 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 APOLD1Q96LR9 279 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 COPS8Q99627 209 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 ASPSCR1Q9BZE9 553 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 POLG2Q9UHN1 485 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 SPO11Q9Y5K1 396 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 WFS1O76024 890 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 EPB42P16452 691 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 AOC1P19801 751 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 NR4A1P22736 598 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 SCAPQ12770 1279 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 MAPKAPK3Q16644 382 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 PABPC1LQ4VXU2 614 aaKnown RBP12.32□□□□□ -0.44
DDR1-224ENST00000376567 ARHGAP15Q53QZ3 475 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 CRTC3Q6UUV7 619 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 RANBP10Q6VN20 620 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 COLGALT2Q8IYK4 626 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 CANT1Q8WVQ1 401 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 SORCS1Q8WY21 1168 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 MPP4Q96JB8 637 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 ROGDIQ9GZN7 287 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 CRISPLD1Q9H336 500 aa12.32□□□□□ -0.44
DDR1-224ENST00000376567 NSUN3Q9H649 340 aaKnown RBP12.32□□□□□ -0.44
DDR1-224ENST00000376567 PSMD13Q9UNM6 376 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms