RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 SNX19Q92543 992 aa14.3□□□□□ -0.12
TNFRSF1B-201ENST00000376259 CLPBQ9H078 707 aa14.3□□□□□ -0.12
TNFRSF1B-201ENST00000376259 GKN1Q9NS71 199 aa14.3□□□□□ -0.12
TNFRSF1B-201ENST00000376259 SLC8A2Q9UPR5 921 aa14.3□□□□□ -0.12
TNFRSF1B-201ENST00000376259 INVSQ9Y283 1065 aa14.3□□□□□ -0.12
TNFRSF1B-201ENST00000376259 NUMA1Q14980 2115 aa14.3□□□□□ -0.12
TNFRSF1B-201ENST00000376259 ANKRD31Q8N7Z5 1873 aa14.3□□□□□ -0.12
TNFRSF1B-201ENST00000376259 MYADML2A6NDP7 307 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 FTH1P02794 183 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 CYBBP04839 570 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 CLK1P49759 484 aaKnown RBP14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 POLR2JP52435 117 aaKnown RBP14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 HSPA14Q0VDF9 509 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 POM121L1PQ3SYA9 428 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 UNC50Q53HI1 259 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 UBXN11Q5T124 520 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 AGMOQ6ZNB7 445 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 ATG16L2Q8NAA4 619 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 TNIP2Q8NFZ5 429 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 TPD52L3Q96J77 140 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 PARVBQ9HBI1 364 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 TRNAU1APQ9NX07 287 aaKnown RBP14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 SMPD3Q9NY59 655 aaPredicted RBP14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 AXIN1O15169 862 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 SMIM18P0DKX4 95 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 CHRM1P11229 460 aaPredicted RBP14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 CDK4P11802 303 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 ZNF37AP17032 561 aaPredicted RBP14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 MTHFRP42898 656 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 EIF2B2P49770 351 aaKnown RBP14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 ARHGDIAP52565 204 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 RHOAP61586 193 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 OR4D1Q15615 310 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 ANKDD1AQ495B1 522 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 C2CD4AQ8NCU7 369 aaPredicted RBP14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 ITCHQ96J02 903 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 CCSER2Q9H7U1 834 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 TRMT13Q9NUP7 481 aaKnown RBP14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 UBA2Q9UBT2 640 aaPredicted RBP14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 COL1A2P08123 1366 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 KLHL33A6NCF5 533 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 ECI2O75521 394 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 SBK3P0C264 359 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 LRRC74AQ0VAA2 488 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 BOP1Q14137 746 aaKnown RBP14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 FGD3Q5JSP0 725 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 ZNF678Q5SXM1 525 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 RASAL3Q86YV0 1011 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 FIBCD1Q8N539 461 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 KCTD13Q8WZ19 329 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 IGSF8Q969P0 613 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 KLHL25Q9H0H3 589 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 POLG2Q9UHN1 485 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 PCDHB5Q9Y5E4 795 aa14.29□□□□□ -0.12
TNFRSF1B-201ENST00000376259 HERVK_113P63132 956 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 CYP4F2P78329 520 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 CYP4F3Q08477 520 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 HNRNPDQ14103 355 aaKnown RBP14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 MAPKAPK3Q16644 382 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 LRRC8DQ7L1W4 858 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 ISCA2Q86U28 154 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 CMTR2Q8IYT2 770 aaKnown RBP14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 CENPNQ96H22 339 aaPredicted RBP14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 ERVK-6Q9BXR3 956 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 SCHIP1Q9P0W5 487 aaPredicted RBP14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 LEF1Q9UJU2 399 aaPredicted RBP14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 ABT1Q9ULW3 272 aaKnown RBP14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 RNF11Q9Y3C5 154 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 STAU1O95793 577 aaKnown RBP14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 ALDOCP09972 364 aaKnown RBP14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 KCNE1P15382 129 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 WEE1P30291 646 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 MLLT6P55198 1093 aaPredicted RBP14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 KLHL35Q6PF15 583 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 SPATA17Q96L03 361 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 MUS81Q96NY9 551 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 IGSF5Q9NSI5 407 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 ADGRE2Q9UHX3 823 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 TYW5A2RUC4 315 aaKnown RBP14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 UGT1A1P22309 533 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 UGT1A4P22310 534 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 UGT1A3P35503 534 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 UGT1A5P35504 534 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 CCT8P50990 548 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 LCP2Q13094 533 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 GALNT10Q86SR1 603 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 ZNF280BQ86YH2 543 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 SNX29P2Q8IUI4 249 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 PLD3Q8IV08 490 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 PHACTR4Q8IZ21 702 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 OR52B6Q8NGF0 335 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 EEF1AKMT1Q8WVE0 214 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 OSCP1Q8WVF1 389 aa14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 EXOSC4Q9NPD3 245 aaKnown RBP14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 SUCOQ9UBS9 1254 aaKnown RBP14.28□□□□□ -0.12
TNFRSF1B-201ENST00000376259 SYNDIG1LA6NDD5 238 aa14.27□□□□□ -0.12
TNFRSF1B-201ENST00000376259 UBFD1O14562 309 aaKnown RBP14.27□□□□□ -0.12
TNFRSF1B-201ENST00000376259 DENRO43583 198 aaKnown RBP14.27□□□□□ -0.12
TNFRSF1B-201ENST00000376259 F2P00734 622 aa14.27□□□□□ -0.12
TNFRSF1B-201ENST00000376259 IDO1P14902 403 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms