RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 FKBPLQ9UIM3 349 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 STXBP5LQ9Y2K9 1186 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 OR51F1A6NGY5 319 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 DUSP11O75319 330 aaKnown RBP17.06■□□□□ 0.32
MCF2L-203ENST00000375604 ARF5P84085 180 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 PCBP2Q15366 365 aaKnown RBP eCLIP17.06■□□□□ 0.323e-8■■■■■ 33.9
MCF2L-203ENST00000375604 HPS6Q86YV9 775 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 TWIST2Q8WVJ9 160 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 TMCO1Q9UM00 188 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 CFAP20Q9Y6A4 193 aaKnown RBP17.06■□□□□ 0.32
MCF2L-203ENST00000375604 SNPHO15079 494 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 UGT1A9O60656 530 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 LRIG2O94898 1065 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 GNRH1P01148 92 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 GPR107Q5VW38 600 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 TMEM220Q6QAJ8 160 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 SLC38A2Q96QD8 506 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 UGT1A7Q9HAW7 530 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 UGT1A10Q9HAW8 530 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 UGT1A8Q9HAW9 530 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 POLR3BQ9NW08 1133 aaPredicted RBP17.06■□□□□ 0.32
MCF2L-203ENST00000375604 C15orf41Q9Y2V0 281 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 ASNA1O43681 348 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 CLUP10909 449 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 SULT2A1Q06520 285 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 ZNF598Q86UK7 904 aaKnown RBP17.06■□□□□ 0.32
MCF2L-203ENST00000375604 PLEKHG4BQ96PX9 1271 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 SLC9A7Q96T83 725 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 RPRD1BQ9NQG5 326 aaKnown RBP17.06■□□□□ 0.32
MCF2L-203ENST00000375604 GKN1Q9NS71 199 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 EVA1BQ9NVM1 165 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 A0A0G2JLL6 359 aaPredicted RBP17.06■□□□□ 0.32
MCF2L-203ENST00000375604 NCK1P16333 377 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 BMP7P18075 431 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 GATMP50440 423 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 PDK3Q15120 406 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 PRRT2Q7Z6L0 340 aaPredicted RBP17.06■□□□□ 0.32
MCF2L-203ENST00000375604 SLC43A3Q8NBI5 491 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 CDK15Q96Q40 435 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 SLC39A8Q9C0K1 460 aa17.06■□□□□ 0.32
MCF2L-203ENST00000375604 BTNL10A8MVZ5 291 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 C8AP07357 584 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 MAGP20916 626 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 FUT4P22083 530 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 CDH3P22223 829 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 TRNT1Q96Q11 434 aaKnown RBP17.05■□□□□ 0.32
MCF2L-203ENST00000375604 LMAN2LQ9H0V9 348 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 ABCB10Q9NRK6 738 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 FZD10Q9ULW2 581 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 ROBO1Q9Y6N7 1651 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 KIF1AQ12756 1690 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 DRD4P21917 467 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 FKBP1BP68106 108 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 CAP1Q01518 475 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 GTF2H2Q13888 395 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 SLC1A5Q15758 541 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 GTF2H2CQ6P1K8 395 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 SLAIN1Q8ND83 568 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 NARS2Q96I59 477 aaKnown RBP17.05■□□□□ 0.32
MCF2L-203ENST00000375604 MCUBQ9NWR8 336 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 SUV39H1O43463 412 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 LGR5O75473 907 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 POU2F1P14859 743 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 ETS2P15036 469 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 CHN2P52757 468 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 IRF9Q00978 393 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 GNA12Q03113 381 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 CACNG1Q06432 222 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 CXorf57Q6NSI4 855 aaKnown RBP17.05■□□□□ 0.32
MCF2L-203ENST00000375604 ULK2Q8IYT8 1036 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 SALL4Q9UJQ4 1053 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 ADGRB2O60241 1585 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 MTX2O75431 263 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 SERPINA6P08185 405 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 MTHFRP42898 656 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 ASPAP45381 313 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 SPANXN2Q5MJ10 180 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 PIH1D2Q8WWB5 315 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 OSBPL2Q9H1P3 480 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 ACSS3Q9H6R3 686 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 ZNF222Q9UK12 451 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 PTPN2P17706 415 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 MMP8P22894 467 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 KLF1Q13351 362 aaPredicted RBP17.05■□□□□ 0.32
MCF2L-203ENST00000375604 STRADAQ7RTN6 431 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.05■□□□□ 0.32
MCF2L-203ENST00000375604 C12orf56Q8IXR9 622 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 GPR135Q8IZ08 494 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 LIX1Q8N485 282 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 CPT1BQ92523 772 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 IPPKQ9H8X2 491 aa17.05■□□□□ 0.32
MCF2L-203ENST00000375604 AJAP1Q9UKB5 411 aaPredicted RBP17.05■□□□□ 0.32
MCF2L-203ENST00000375604 HDAC3O15379 428 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 INSIG1O15503 277 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 CFHP08603 1231 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 ALPIP09923 528 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 RYKP34925 604 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 CDKN2BP42772 138 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 RNF43Q68DV7 783 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 CLIP4Q8N3C7 705 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms