RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 OGFOD2Q6N063 350 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 PDXDC2PQ6P474 469 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 SPPL2CQ8IUH8 684 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 A0A075B6Q4 140 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 RNASEH2BQ5TBB1 312 aaKnown RBP6.59□□□□□ -1.35
UBR4-204ENST00000375254 RPLP0P6Q8NHW5 317 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 IDI2Q9BXS1 227 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 AGPAT3Q9NRZ7 376 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 ABL1P00519 1130 aa6.59□□□□□ -1.36
UBR4-204ENST00000375254 HIST1H2ABP04908 130 aa6.59□□□□□ -1.36
UBR4-204ENST00000375254 HK1P19367 917 aa6.59□□□□□ -1.36
UBR4-204ENST00000375254 BLOC1S1P78537 153 aa6.59□□□□□ -1.36
UBR4-204ENST00000375254 METTL2BQ6P1Q9 378 aaKnown RBP6.59□□□□□ -1.36
UBR4-204ENST00000375254 HIST3H2AQ7L7L0 130 aa6.59□□□□□ -1.36
UBR4-204ENST00000375254 HIST1H2ACQ93077 130 aa6.59□□□□□ -1.36
UBR4-204ENST00000375254 PRICKLE1Q96MT3 831 aaPredicted RBP6.59□□□□□ -1.36
UBR4-204ENST00000375254 MARK1Q9P0L2 795 aa6.59□□□□□ -1.36
UBR4-204ENST00000375254 SCP2D1Q9UJQ7 156 aa6.59□□□□□ -1.36
UBR4-204ENST00000375254 MOCS2O96007 188 aaPredicted RBP6.59□□□□□ -1.36
UBR4-204ENST00000375254 SLC16A2P36021 539 aa6.59□□□□□ -1.36
UBR4-204ENST00000375254 OR52E8Q6IFG1 317 aa6.59□□□□□ -1.36
UBR4-204ENST00000375254 SCARA5Q6ZMJ2 495 aa6.59□□□□□ -1.36
UBR4-204ENST00000375254 TREML1Q86YW5 311 aa6.59□□□□□ -1.36
UBR4-204ENST00000375254 RELL1Q8IUW5 271 aa6.59□□□□□ -1.36
UBR4-204ENST00000375254 HDAC10Q969S8 669 aa6.59□□□□□ -1.36
UBR4-204ENST00000375254 S100A16Q96FQ6 103 aaKnown RBP6.59□□□□□ -1.36
UBR4-204ENST00000375254 SCPEP1Q9HB40 452 aa6.59□□□□□ -1.36
UBR4-204ENST00000375254 SNTG1Q9NSN8 517 aa6.59□□□□□ -1.36
UBR4-204ENST00000375254 GABBR1Q9UBS5 961 aa6.59□□□□□ -1.36
UBR4-204ENST00000375254 PRKYO43930 277 aa6.59□□□□□ -1.36
UBR4-204ENST00000375254 EPB42P16452 691 aa6.59□□□□□ -1.36
UBR4-204ENST00000375254 SSTR1P30872 391 aa6.59□□□□□ -1.36
UBR4-204ENST00000375254 BAG6P46379 1132 aa6.59□□□□□ -1.36
UBR4-204ENST00000375254 TLR1Q15399 786 aa6.59□□□□□ -1.36
UBR4-204ENST00000375254 BEND5Q7L4P6 421 aa6.59□□□□□ -1.36
UBR4-204ENST00000375254 CD300LFQ8TDQ1 290 aa6.59□□□□□ -1.36
UBR4-204ENST00000375254 SGPL1O95470 568 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 ALDH7A1P49419 539 aaKnown RBP6.58□□□□□ -1.36
UBR4-204ENST00000375254 GRK1Q15835 563 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 AGAP6Q5VW22 663 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 C3P1Q6ZMU1 363 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 EFCAB3Q8N7B9 438 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 GALNT11Q8NCW6 608 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 AGAP4Q96P64 663 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 EBNA1BP2Q99848 306 aaKnown RBP6.58□□□□□ -1.36
UBR4-204ENST00000375254 ADAM2Q99965 735 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 CTPS2Q9NRF8 586 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 KLHL21Q9UJP4 597 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 PLCH2O75038 1416 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 XDHP47989 1333 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 CD53P19397 219 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 VAMP1P23763 118 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 DDX6P26196 483 aaKnown RBP eCLIP6.58□□□□□ -1.364e-18■□□□□ 9.5
UBR4-204ENST00000375254 HLCSP50747 726 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 APTXQ7Z2E3 356 aaKnown RBP6.58□□□□□ -1.36
UBR4-204ENST00000375254 MFSD8Q8NHS3 518 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 SETD7Q8WTS6 366 aaKnown RBP6.58□□□□□ -1.36
UBR4-204ENST00000375254 FAM193BQ96PV7 902 aaPredicted RBP6.58□□□□□ -1.36
UBR4-204ENST00000375254 THUMPD1Q9NXG2 353 aaKnown RBP6.58□□□□□ -1.36
UBR4-204ENST00000375254 ANGPT4Q9Y264 503 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 NMT2O60551 498 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 TIPRLO75663 272 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 HLA-FP30511 346 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 RD3Q7Z3Z2 195 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 MCOLN2Q8IZK6 566 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 ZNF614Q8N883 585 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 ATP13A3Q9H7F0 1226 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 LCMT2O60294 686 aaKnown RBP6.58□□□□□ -1.36
UBR4-204ENST00000375254 LTA4HP09960 611 aaKnown RBP6.58□□□□□ -1.36
UBR4-204ENST00000375254 NCF1P14598 390 aaPredicted RBP6.58□□□□□ -1.36
UBR4-204ENST00000375254 SLC1A2P43004 574 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 SLC27A3Q5K4L6 730 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 DRICH1Q6PGQ1 229 aaPredicted RBP6.58□□□□□ -1.36
UBR4-204ENST00000375254 GCNT7Q6ZNI0 430 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 ASRGL1Q7L266 308 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 OR2T12Q8NG77 320 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 BRSK1Q8TDC3 778 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 SLC47A1Q96FL8 570 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 MCEEQ96PE7 176 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 PURBQ96QR8 312 aaKnown RBP6.58□□□□□ -1.36
UBR4-204ENST00000375254 SENP2Q9HC62 589 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 MAP10Q9P2G4 905 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 RGS9O75916 674 aaPredicted RBP6.58□□□□□ -1.36
UBR4-204ENST00000375254 DNAJA1P31689 397 aaKnown RBP6.58□□□□□ -1.36
UBR4-204ENST00000375254 IL6STP40189 918 aaPredicted RBP6.58□□□□□ -1.36
UBR4-204ENST00000375254 BCAMP50895 628 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 STON2Q8WXE9 905 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 ZNF408Q9H9D4 720 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 ERN1O75460 977 aaKnown RBP6.58□□□□□ -1.36
UBR4-204ENST00000375254 OTCP00480 354 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 E2F1Q01094 437 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 GAD2Q05329 585 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 SETMARQ53H47 684 aaPredicted RBP6.58□□□□□ -1.36
UBR4-204ENST00000375254 DAGLBQ8NCG7 672 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 LRRTM2O43300 516 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 BMP3P12645 472 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 ZNF235Q14590 738 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 ZDHHC5Q9C0B5 715 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 PCDHB5Q9Y5E4 795 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 SEC22BO75396 215 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 232.1 ms