RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 ZMPSTE24O75844 475 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 SRP72O76094 671 aaKnown RBP8.17□□□□□ -1.1
UBR4-202ENST00000375224 PRLP01236 227 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 LRG1P02750 347 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 ZNF37AP17032 561 aaPredicted RBP8.17□□□□□ -1.1
UBR4-202ENST00000375224 PIK3R1P27986 724 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 EPHA3P29320 983 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 EPHB1P54762 984 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 RPL26P61254 145 aaKnown RBP8.17□□□□□ -1.1
UBR4-202ENST00000375224 WDR5P61964 334 aaKnown RBP8.17□□□□□ -1.1
UBR4-202ENST00000375224 SLC25A3Q00325 362 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 MAPRE2Q15555 327 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 TMTC4Q5T4D3 741 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 ZNF549Q6P9A3 640 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 AAGABQ6PD74 315 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 B3GNT6Q6ZMB0 384 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 Q6ZNB5 142 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 TMEM150AQ86TG1 271 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 CROCCP3Q8IVE0 287 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 STK40Q8N2I9 435 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 PHTF2Q8N3S3 785 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 CPXM2Q8N436 756 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 FBXO27Q8NI29 283 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 ANKRD49Q8WVL7 239 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 JADE3Q92613 823 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 ACDQ96AP0 544 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 EXOC2Q96KP1 924 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 GCNAQ96QF7 691 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 YME1L1Q96TA2 773 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 UNKQ9C0B0 810 aaKnown RBP8.17□□□□□ -1.1
UBR4-202ENST00000375224 WDR55Q9H6Y2 383 aaPredicted RBP8.17□□□□□ -1.1
UBR4-202ENST00000375224 PTTG2Q9NZH5 202 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 SLC7A8Q9UHI5 535 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 PRPF19Q9UMS4 504 aaKnown RBP8.17□□□□□ -1.1
UBR4-202ENST00000375224 ACTL7AQ9Y615 435 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 CPQQ9Y646 472 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 A0A088AWK7 358 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 LOC100653049A0A140TA62 436 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 CXorf51AA0A1B0GTR3 108 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 SYCE1LA8MT33 242 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 H7C0S8 307 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 VPS26AO75436 327 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 KRT34O76011 436 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 LYNP07948 512 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 CCDC159P0C7I6 412 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 CLCN4P51793 760 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 HERVK_113P63132 956 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 NR1D2Q14995 579 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 MPPE1Q53F39 396 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 MPP7Q5T2T1 576 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 CUZD1Q86UP6 607 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 GRAMD2AQ8IUY3 354 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 TMEM199Q8N511 208 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 ARL14EPQ8N8R7 260 aaPredicted RBP8.16□□□□□ -1.1
UBR4-202ENST00000375224 GOLM1Q8NBJ4 401 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 MDGA1Q8NFP4 955 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 STAG3L4Q8TBR4 150 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 LPGAT1Q92604 370 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 VPS50Q96JG6 964 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 LENG8Q96PV6 779 aaPredicted RBP8.16□□□□□ -1.1
UBR4-202ENST00000375224 ERVK-6Q9BXR3 956 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 DERL2Q9GZP9 239 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 CYP4F12Q9HCS2 524 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 LHX3Q9UBR4 397 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 BCAP29Q9UHQ4 241 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 PKP3Q9Y446 797 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 PCDHGC4Q9Y5F7 938 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 LCHNA4D1U4 455 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 NEMP2A6NFY4 417 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 MEI4A8MW99 385 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 GFRA2O00451 464 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 TSPAN9O75954 239 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 SPATA31D3P0C874 917 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 CTSAP10619 480 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 DDX5P17844 614 aaKnown RBP8.16□□□□□ -1.1
UBR4-202ENST00000375224 CCR10P46092 362 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 CSNK1DP48730 415 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 DEFB103AP81534 67 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 SLC7A9P82251 487 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 BTKQ06187 659 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 TUBA3CQ13748 450 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 SEMA3AQ14563 771 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 PTPRCAPQ14761 206 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 ZNF678Q5SXM1 525 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 ARMC12Q5T9G4 340 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 DEPDC1Q5TB30 811 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 UGT3A1Q6NUS8 523 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 TMEM207Q6UWW9 146 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 RIPOR1Q6ZS17 1223 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 SPATA31D4Q6ZUB0 917 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 HTR3DQ70Z44 454 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 KYQ8NBH2 561 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 SUN5Q8TC36 379 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 FNDC8Q8TC99 324 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 DIS3LQ8TF46 1054 aaKnown RBP8.16□□□□□ -1.1
UBR4-202ENST00000375224 WBP2Q969T9 261 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 FAM136AQ96C01 138 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 VWCEQ96DN2 955 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 PHF21BQ96EK2 531 aa8.16□□□□□ -1.1
UBR4-202ENST00000375224 HSPBAP1Q96EW2 488 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms