RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 A8MV72 311 aaPredicted RBP20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 VDRP11473 427 aa20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 UBA1P22314 1058 aaKnown RBP20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 CES1P23141 567 aa20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 TARBP2Q15633 366 aaKnown RBP20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 ZFP69Q49AA0 526 aa20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 IL31Q6EBC2 164 aa20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 ZPBP2Q6X784 338 aa20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 SIMC1Q8NDZ2 872 aa20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 LGALS12Q96DT0 336 aa20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 TMEM74Q96NL1 305 aa20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 PRDM12Q9H4Q4 367 aa20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 CASS4Q9NQ75 786 aa20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 NRBP2Q9NSY0 501 aa20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 SIX4Q9UIU6 781 aa20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 CPSF3Q9UKF6 684 aaKnown RBP20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 PTGDR2Q9Y5Y4 395 aa20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 USP3Q9Y6I4 520 aa20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 PABPN1LA6NDY0 278 aaKnown RBP20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 SYCE1LA8MT33 242 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 CENPXA8MT69 81 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 SSX4O60224 188 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 PEX10O60683 326 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 AP2A1O95782 977 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 STMN1P16949 149 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 HRH2P25021 359 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 ZNF135P52742 658 aaPredicted RBP20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 CTBP1Q13363 440 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 RNF135Q8IUD6 432 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 PLD3Q8IV08 490 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 DENND6AQ8IWF6 608 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 CADM2Q8N3J6 435 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 PSD4Q8NDX1 1056 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 ZNF555Q8NEP9 628 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 RASSF5Q8WWW0 418 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 COQ7Q99807 217 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 HOXC10Q9NYD6 342 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 KLHL8Q9P2G9 620 aaPredicted RBP20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 OSGIN1Q9UJX0 560 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 LCTP09848 1927 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 SAGE2PA6NJ88 616 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 A8MT66 165 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 MSCO60682 206 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 KRT6AP02538 564 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 KRT6BP04259 564 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 ARNTP27540 789 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 GLUD2P49448 558 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 STAT5BP51692 787 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 SLC6A3Q01959 620 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 C19orf57Q0VDD7 668 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 BRMS1LQ5PSV4 323 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 HS3ST5Q8IZT8 346 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 NLGN4XQ8N0W4 816 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 C12orf29Q8N999 325 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 C19orf60Q96EN9 201 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 ZFYVE19Q96K21 471 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 GAD1Q99259 594 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 DHRS9Q9BPW9 319 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 MRPL4Q9BYD3 311 aaKnown RBP20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 ERVK-18Q9QC07 812 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 OPTCQ9UBM4 332 aa20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 INTS6Q9UL03 887 aaKnown RBP20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 OAS3Q9Y6K5 1087 aaKnown RBP20.46■□□□□ 0.87
TMEFF1-201ENST00000374879 BMP1P13497 986 aa20.45■□□□□ 0.86
TMEFF1-201ENST00000374879 CD6P30203 668 aa20.45■□□□□ 0.86
TMEFF1-201ENST00000374879 ISL1P61371 349 aa20.45■□□□□ 0.86
TMEFF1-201ENST00000374879 TUBA1BP68363 451 aa20.45■□□□□ 0.86
TMEFF1-201ENST00000374879 PPP2R2BQ00005 443 aa20.45■□□□□ 0.86
TMEFF1-201ENST00000374879 KCNAB2Q13303 367 aa20.45■□□□□ 0.86
TMEFF1-201ENST00000374879 TOP3AQ13472 1001 aaPredicted RBP20.45■□□□□ 0.86
TMEFF1-201ENST00000374879 CRY1Q16526 586 aa20.45■□□□□ 0.86
TMEFF1-201ENST00000374879 CDONQ4KMG0 1287 aa20.45■□□□□ 0.86
TMEFF1-201ENST00000374879 TUBA1AQ71U36 451 aa20.45■□□□□ 0.86
TMEFF1-201ENST00000374879 SYTL1Q8IYJ3 562 aa20.45■□□□□ 0.86
TMEFF1-201ENST00000374879 FBXO5Q9UKT4 447 aa20.45■□□□□ 0.86
TMEFF1-201ENST00000374879 FAM95CA0A1B0GW59 222 aa20.45■□□□□ 0.86
TMEFF1-201ENST00000374879 AGAP5A6NIR3 686 aa20.45■□□□□ 0.86
TMEFF1-201ENST00000374879 OGTO15294 1046 aa20.45■□□□□ 0.86
TMEFF1-201ENST00000374879 IL12AP29459 219 aa20.45■□□□□ 0.86
TMEFF1-201ENST00000374879 HTR3AP46098 478 aa20.45■□□□□ 0.86
TMEFF1-201ENST00000374879 PRSS48Q7RTY5 328 aa20.45■□□□□ 0.86
TMEFF1-201ENST00000374879 HSFY1Q96LI6 401 aa20.45■□□□□ 0.86
TMEFF1-201ENST00000374879 CHST12Q9NRB3 414 aa20.45■□□□□ 0.86
TMEFF1-201ENST00000374879 PAQR5Q9NXK6 330 aaPredicted RBP20.45■□□□□ 0.86
TMEFF1-201ENST00000374879 RABL2AQ9UBK7 228 aaPredicted RBP20.45■□□□□ 0.86
TMEFF1-201ENST00000374879 CCDC154A6NI56 674 aa20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 IPO13O94829 963 aaKnown RBP20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 PSMB9P28065 219 aa20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 OR2B6P58173 313 aa20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 NFYCQ13952 458 aa20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 CSHL1Q14406 222 aa20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 GRB7Q14451 532 aa20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 ACOX1Q15067 660 aa20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 NPTX1Q15818 432 aa20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 ZNF484Q5JVG2 852 aa20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 VARS2Q5ST30 1063 aaKnown RBP20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 MIER2Q8N344 545 aa20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 CNIH3Q8TBE1 160 aa20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 MCOLN3Q8TDD5 553 aa20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 MUC13Q9H3R2 512 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms