RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 KYQ8NBH2 561 aa15.48■□□□□ 0.07
CCDC40-202ENST00000374876 PYDC1Q8WXC3 89 aa15.48■□□□□ 0.07
CCDC40-202ENST00000374876 OTUB2Q96DC9 234 aa15.48■□□□□ 0.07
CCDC40-202ENST00000374876 MYEOVQ96EZ4 313 aa15.48■□□□□ 0.07
CCDC40-202ENST00000374876 PLK2Q9NYY3 685 aa15.48■□□□□ 0.07
CCDC40-202ENST00000374876 ZNF510Q9Y2H8 683 aa15.48■□□□□ 0.07
CCDC40-202ENST00000374876 KCTD3Q9Y597 815 aa15.48■□□□□ 0.07
CCDC40-202ENST00000374876 F5P12259 2224 aa15.47■□□□□ 0.07
CCDC40-202ENST00000374876 A8MT66 165 aa15.47■□□□□ 0.07
CCDC40-202ENST00000374876 TSPAN3O60637 253 aa15.47■□□□□ 0.07
CCDC40-202ENST00000374876 GJB3O75712 270 aa15.47■□□□□ 0.07
CCDC40-202ENST00000374876 S1PR4O95977 384 aa15.47■□□□□ 0.07
CCDC40-202ENST00000374876 FGF1P05230 155 aa15.47■□□□□ 0.07
CCDC40-202ENST00000374876 HLA-DPA1P20036 260 aa15.47■□□□□ 0.07
CCDC40-202ENST00000374876 MRPS35P82673 323 aaKnown RBP15.47■□□□□ 0.07
CCDC40-202ENST00000374876 EFCAB3Q8N7B9 438 aa15.47■□□□□ 0.07
CCDC40-202ENST00000374876 NAT16Q8N8M0 369 aa15.47■□□□□ 0.07
CCDC40-202ENST00000374876 FLCNQ8NFG4 579 aa15.47■□□□□ 0.07
CCDC40-202ENST00000374876 BLOC1S5Q8TDH9 187 aa15.47■□□□□ 0.07
CCDC40-202ENST00000374876 FEM1CQ96JP0 617 aa15.47■□□□□ 0.07
CCDC40-202ENST00000374876 UBXN10Q96LJ8 280 aa15.47■□□□□ 0.07
CCDC40-202ENST00000374876 ZNF385DQ9H6B1 395 aa15.47■□□□□ 0.07
CCDC40-202ENST00000374876 C11orf16Q9NQ32 467 aa15.47■□□□□ 0.07
CCDC40-202ENST00000374876 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.47■□□□□ 0.07
CCDC40-202ENST00000374876 MARCH4Q9P2E8 410 aaPredicted RBP15.47■□□□□ 0.07
CCDC40-202ENST00000374876 MTF2Q9Y483 593 aaPredicted RBP15.47■□□□□ 0.07
CCDC40-202ENST00000374876 COL4A2P08572 1712 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 OR51F1A6NGY5 319 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 SMNDC1O75940 238 aaKnown RBP eCLIP15.46■□□□□ 0.07
CCDC40-202ENST00000374876 SLC6A4P31645 630 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 CTHP32929 405 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 CDKN2DP55273 166 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 IRGCQ6NXR0 463 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 ADGRG6Q86SQ4 1221 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 SLC22A9Q8IVM8 553 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 CFAP52Q8N1V2 620 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 HIPK4Q8NE63 616 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 FAM136AQ96C01 138 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 FAR2Q96K12 515 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 MARK4Q96L34 752 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 TBATAQ96M53 351 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 SERPINI1Q99574 410 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 FOXQ1Q9C009 403 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 FBRSL1Q9HCM7 1045 aaKnown RBP15.46■□□□□ 0.07
CCDC40-202ENST00000374876 PRPF19Q9UMS4 504 aaKnown RBP15.46■□□□□ 0.07
CCDC40-202ENST00000374876 NEDD8-MDP1E9PL57 170 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 MUSKO15146 869 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 ACSL4O60488 711 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 EPOP01588 193 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 SERPINF2P08697 491 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 ADH5P11766 374 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 CD1EP15812 388 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 SLC26A3P40879 764 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 SLC6A11P48066 632 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 PLK1P53350 603 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 STARD6P59095 220 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 PRKCQQ04759 706 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 ILF2Q12905 390 aaKnown RBP15.46■□□□□ 0.07
CCDC40-202ENST00000374876 GALNT3Q14435 633 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 HERC3Q15034 1050 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 GAB4Q2WGN9 574 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 ADGRF1Q5T601 910 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 FAM45BPQ6NSW5 357 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 IZUMO2Q6UXV1 221 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 C12orf40Q86WS4 652 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 KBTBD2Q8IY47 623 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 DSELQ8IZU8 1212 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 BBS5Q8N3I7 341 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 CEP70Q8NHQ1 597 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 FAM45AQ8TCE6 357 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 ANKRD49Q8WVL7 239 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 FAM3CQ92520 227 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 PBXIP1Q96AQ6 731 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 PHF21BQ96EK2 531 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 ZNF599Q96NL3 588 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 SUDS3Q9H7L9 328 aaPredicted RBP15.46■□□□□ 0.07
CCDC40-202ENST00000374876 TBC1D17Q9HA65 648 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 ZBTB26Q9HCK0 441 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 NDRG2Q9UN36 371 aaKnown RBP15.46■□□□□ 0.07
CCDC40-202ENST00000374876 CRYL1Q9Y2S2 319 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 FIS1Q9Y3D6 152 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 ARL5AQ9Y689 179 aa15.46■□□□□ 0.07
CCDC40-202ENST00000374876 SKAP2O75563 359 aaPredicted RBP15.45■□□□□ 0.06
CCDC40-202ENST00000374876 ADH1CP00326 375 aa15.45■□□□□ 0.06
CCDC40-202ENST00000374876 SLC11A2P49281 568 aa15.45■□□□□ 0.06
CCDC40-202ENST00000374876 GALK1P51570 392 aa15.45■□□□□ 0.06
CCDC40-202ENST00000374876 SULT2A1Q06520 285 aa15.45■□□□□ 0.06
CCDC40-202ENST00000374876 PON2Q15165 354 aa15.45■□□□□ 0.06
CCDC40-202ENST00000374876 IL31Q6EBC2 164 aa15.45■□□□□ 0.06
CCDC40-202ENST00000374876 MRNIPQ6NTE8 343 aa15.45■□□□□ 0.06
CCDC40-202ENST00000374876 DHDDSQ86SQ9 333 aa15.45■□□□□ 0.06
CCDC40-202ENST00000374876 RALGPS2Q86X27 583 aaPredicted RBP15.45■□□□□ 0.06
CCDC40-202ENST00000374876 SPNS2Q8IVW8 549 aa15.45■□□□□ 0.06
CCDC40-202ENST00000374876 PEX13Q92968 403 aa15.45■□□□□ 0.06
CCDC40-202ENST00000374876 RCN3Q96D15 328 aa15.45■□□□□ 0.06
CCDC40-202ENST00000374876 SHDQ96IW2 340 aa15.45■□□□□ 0.06
CCDC40-202ENST00000374876 MAELQ96JY0 434 aaKnown RBP15.45■□□□□ 0.06
CCDC40-202ENST00000374876 DNAJC1Q96KC8 554 aaKnown RBP15.45■□□□□ 0.06
CCDC40-202ENST00000374876 BBS2Q9BXC9 721 aa15.45■□□□□ 0.06
CCDC40-202ENST00000374876 C8orf33Q9H7E9 229 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms