RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 PGK1P00558 417 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 PABPC1LQ4VXU2 614 aaKnown RBP17.31■□□□□ 0.36
PTPRU-202ENST00000373779 TMEM214Q6NUQ4 689 aaKnown RBP17.31■□□□□ 0.36
PTPRU-202ENST00000373779 PLEKHM3Q6ZWE6 761 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 PHF21AQ96BD5 680 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 CHID1Q9BWS9 393 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 ATP13A3Q9H7F0 1226 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 CD320Q9NPF0 282 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 INTS10Q9NVR2 710 aaKnown RBP17.31■□□□□ 0.36
PTPRU-202ENST00000373779 OR4F21O95013 312 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 IL1BP01584 269 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 PBX3P40426 434 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 MAGEA10P43363 369 aaPredicted RBP17.31■□□□□ 0.36
PTPRU-202ENST00000373779 TARBP2Q15633 366 aaKnown RBP17.31■□□□□ 0.36
PTPRU-202ENST00000373779 EIF3MQ7L2H7 374 aaKnown RBP17.31■□□□□ 0.36
PTPRU-202ENST00000373779 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.31■□□□□ 0.36
PTPRU-202ENST00000373779 ARL10Q8N8L6 244 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 CAPSLQ8WWF8 208 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 CIPCQ9C0C6 399 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 ABCG8Q9H221 673 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 TALDO1P37837 337 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 CDK9P50750 372 aaKnown RBP17.31■□□□□ 0.36
PTPRU-202ENST00000373779 RPS7P62081 194 aaKnown RBP17.31■□□□□ 0.36
PTPRU-202ENST00000373779 POLR2LP62875 67 aaKnown RBP17.31■□□□□ 0.36
PTPRU-202ENST00000373779 TMEM126BQ8IUX1 230 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 ABHD8Q96I13 439 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 CLN6Q9NWW5 311 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 HLA-DQB2P05538 268 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 OGNP20774 298 aaKnown RBP17.31■□□□□ 0.36
PTPRU-202ENST00000373779 WNT7BP56706 349 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 PSMG2Q969U7 264 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 DNAJC5Q9H3Z4 198 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 ZDHHC6Q9H6R6 413 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 IPPKQ9H8X2 491 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 TLL2Q9Y6L7 1015 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 A0A0G2JLL6 359 aaPredicted RBP17.3■□□□□ 0.36
PTPRU-202ENST00000373779 TSPAN19P0C672 248 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 ITGA2P17301 1181 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 TAF10Q12962 218 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 PRRT2Q7Z6L0 340 aaPredicted RBP17.3■□□□□ 0.36
PTPRU-202ENST00000373779 YAF2Q8IY57 180 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 ATL1Q8WXF7 558 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 IFT80Q9P2H3 777 aaPredicted RBP17.3■□□□□ 0.36
PTPRU-202ENST00000373779 MANSC4A6NHS7 340 aaPredicted RBP17.3■□□□□ 0.36
PTPRU-202ENST00000373779 SCAMP3O14828 347 aaKnown RBP17.3■□□□□ 0.36
PTPRU-202ENST00000373779 RHDQ02161 417 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 PAGE2BQ5JRK9 111 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 ERAP2Q6P179 960 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 B3GNT9Q6UX72 402 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 HFE2Q6ZVN8 426 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 MCFD2Q8NI22 146 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 CENPIQ92674 756 aaPredicted RBP17.3■□□□□ 0.36
PTPRU-202ENST00000373779 HAPLN3Q96S86 360 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 FTHL17Q9BXU8 183 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 ADAMTS6Q9UKP5 1117 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 HCRTO43612 131 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 CKBP12277 381 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 ZNF12P17014 697 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 SLC26A3P40879 764 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 ARHGAP1Q07960 439 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 SIM2Q14190 667 aaPredicted RBP17.3■□□□□ 0.36
PTPRU-202ENST00000373779 PAGE2Q7Z2X7 111 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 AKTIPQ9H8T0 292 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 EIF2B4Q9UI10 523 aaKnown RBP17.3■□□□□ 0.36
PTPRU-202ENST00000373779 PDE10AQ9Y233 779 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 MTHFD1P11586 935 aaKnown RBP17.3■□□□□ 0.36
PTPRU-202ENST00000373779 CYP4F2P78329 520 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 CYP4F3Q08477 520 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 CCNIQ14094 377 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 TSSK3Q96PN8 268 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 VPS35Q96QK1 796 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 ZCCHC2Q9C0B9 1178 aaKnown RBP17.3■□□□□ 0.36
PTPRU-202ENST00000373779 VPS4AQ9UN37 437 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 RAI2Q9Y5P3 530 aa17.3■□□□□ 0.36
PTPRU-202ENST00000373779 KPNA5O15131 536 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 EFCAB14O75071 495 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 XKR6Q5GH73 641 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 SVOPLQ8N434 492 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 BRSK1Q8TDC3 778 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 UBASH3BQ8TF42 649 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 PCYT2Q99447 389 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 SLC39A3Q9BRY0 314 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 NDEL1Q9GZM8 345 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 TFB2MQ9H5Q4 396 aaKnown RBP17.29■□□□□ 0.36
PTPRU-202ENST00000373779 MOCS1Q9NZB8 636 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 SCELO95171 688 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 ANGPTL1O95841 491 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 HPS1Q92902 700 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 HAPLN2Q9GZV7 340 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 SUV39H1O43463 412 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 CLDN11O75508 207 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 SNRPD1P62314 119 aaKnown RBP17.29■□□□□ 0.36
PTPRU-202ENST00000373779 SPIBQ01892 262 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 IL10RBQ08334 325 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 ZBED5Q49AG3 693 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 NODALQ96S42 347 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 OAZ3Q9UMX2 235 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 ARL5CA6NH57 179 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 OR6C75A6NL08 312 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 ARPC2O15144 300 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms