RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 TRPM6Q9BX84 2022 aa20.42■□□□□ 0.86
SYNC-201ENST00000373484 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.42■□□□□ 0.86
SYNC-201ENST00000373484 TSPAN11A1L157 253 aa20.42■□□□□ 0.86
SYNC-201ENST00000373484 LRRC72A6NJI9 287 aa20.42■□□□□ 0.86
SYNC-201ENST00000373484 C10orf142B7Z368 130 aa20.42■□□□□ 0.86
SYNC-201ENST00000373484 FKBP6O75344 327 aa20.42■□□□□ 0.86
SYNC-201ENST00000373484 C1QAP02745 245 aa20.42■□□□□ 0.86
SYNC-201ENST00000373484 RBP3P10745 1247 aa20.42■□□□□ 0.86
SYNC-201ENST00000373484 PYGBP11216 843 aa20.42■□□□□ 0.86
SYNC-201ENST00000373484 ADRB3P13945 408 aa20.42■□□□□ 0.86
SYNC-201ENST00000373484 BGNP21810 368 aa20.42■□□□□ 0.86
SYNC-201ENST00000373484 PTGER3P43115 390 aa20.42■□□□□ 0.86
SYNC-201ENST00000373484 BCL2L1Q07817 233 aa20.42■□□□□ 0.86
SYNC-201ENST00000373484 ITKQ08881 620 aa20.42■□□□□ 0.86
SYNC-201ENST00000373484 KBTBD12Q3ZCT8 623 aa20.42■□□□□ 0.86
SYNC-201ENST00000373484 HSPA12BQ96MM6 686 aa20.42■□□□□ 0.86
SYNC-201ENST00000373484 SRPK1Q96SB4 655 aaKnown RBP20.42■□□□□ 0.86
SYNC-201ENST00000373484 SEMA3CQ99985 751 aa20.42■□□□□ 0.86
SYNC-201ENST00000373484 FBXO6Q9NRD1 293 aaPredicted RBP20.42■□□□□ 0.86
SYNC-201ENST00000373484 SEPT10Q9P0V9 454 aa20.42■□□□□ 0.86
SYNC-201ENST00000373484 LRRK1Q38SD2 2015 aa20.42■□□□□ 0.86
SYNC-201ENST00000373484 PLXNA2O75051 1894 aa20.42■□□□□ 0.86
SYNC-201ENST00000373484 OTOGLQ3ZCN5 2332 aa20.42■□□□□ 0.86
SYNC-201ENST00000373484 PRR23AA6NEV1 266 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 ENO4A6NNW6 628 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 H7C0C1 242 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 MTSS1O43312 755 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 CES1P23141 567 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 PTPN3P26045 913 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 PI4KAP42356 2102 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 ATP5OP48047 213 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 DHPSP49366 369 aaPredicted RBP20.41■□□□□ 0.86
SYNC-201ENST00000373484 RPL26P61254 145 aaKnown RBP20.41■□□□□ 0.86
SYNC-201ENST00000373484 FBXL19Q6PCT2 694 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 MYLK4Q86YV6 388 aaPredicted RBP20.41■□□□□ 0.86
SYNC-201ENST00000373484 FOXJ1Q92949 421 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 ECHDC3Q96DC8 303 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 CEP41Q9BYV8 373 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 CHMP2BQ9UQN3 213 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 TTLL3Q9Y4R7 772 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 GPR179Q6PRD1 2367 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 TCRBV7S3A2A0A539 114 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 METTL12A8MUP2 240 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 GOLGA8RI6L899 631 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 EPN2O95208 641 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 SERPINB9P50453 376 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 SH3BGRP55822 239 aaPredicted RBP20.41■□□□□ 0.86
SYNC-201ENST00000373484 ACTR3P61158 418 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 AP2B1P63010 937 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 DSC2Q02487 901 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 WASHC5Q12768 1159 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 TEX44Q53QW1 395 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 CYS1Q717R9 158 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 ARMCX6Q7L4S7 300 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 SCUBE1Q8IWY4 988 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 FAM71DQ8N9W8 422 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 MCUQ8NE86 351 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 ARRDC2Q8TBH0 407 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 WDR60Q8WVS4 1066 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 HTR3CQ8WXA8 447 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 RAB7BQ96AH8 199 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 NMUR2Q9GZQ4 415 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 FAM96AQ9H5X1 160 aa20.41■□□□□ 0.86
SYNC-201ENST00000373484 B2RBV5 119 aa20.4■□□□□ 0.86
SYNC-201ENST00000373484 SOCS5O75159 536 aa20.4■□□□□ 0.86
SYNC-201ENST00000373484 KRT38O76015 456 aa20.4■□□□□ 0.86
SYNC-201ENST00000373484 CNTFP26441 200 aa20.4■□□□□ 0.86
SYNC-201ENST00000373484 BASP1P80723 227 aaKnown RBP20.4■□□□□ 0.86
SYNC-201ENST00000373484 XIAPP98170 497 aa20.4■□□□□ 0.86
SYNC-201ENST00000373484 FAM182AQ5T1J6 154 aa20.4■□□□□ 0.86
SYNC-201ENST00000373484 LYSMD4Q5XG99 296 aa20.4■□□□□ 0.86
SYNC-201ENST00000373484 BRAT1Q6PJG6 821 aa20.4■□□□□ 0.86
SYNC-201ENST00000373484 TIFABQ6ZNK6 161 aa20.4■□□□□ 0.86
SYNC-201ENST00000373484 ASCL5Q7RTU5 278 aa20.4■□□□□ 0.86
SYNC-201ENST00000373484 CDKL3Q8IVW4 592 aaPredicted RBP20.4■□□□□ 0.86
SYNC-201ENST00000373484 TEKT5Q96M29 485 aa20.4■□□□□ 0.86
SYNC-201ENST00000373484 AGAP3Q96P47 875 aa20.4■□□□□ 0.86
SYNC-201ENST00000373484 PREBQ9HCU5 417 aa20.4■□□□□ 0.86
SYNC-201ENST00000373484 CPSF2Q9P2I0 782 aaKnown RBP20.4■□□□□ 0.86
SYNC-201ENST00000373484 PCDHGC4Q9Y5F7 938 aa20.4■□□□□ 0.86
SYNC-201ENST00000373484 TBC1D3DA0A087WVF3 549 aa20.39■□□□□ 0.86
SYNC-201ENST00000373484 TBC1D3IA0A087WXS9 549 aa20.39■□□□□ 0.86
SYNC-201ENST00000373484 TBC1D3EA0A087X179 549 aa20.39■□□□□ 0.86
SYNC-201ENST00000373484 TBC1D3KA0A087X1G2 549 aa20.39■□□□□ 0.86
SYNC-201ENST00000373484 TBC1D3FA6NER0 549 aaPredicted RBP20.39■□□□□ 0.86
SYNC-201ENST00000373484 TBC1D3LB9A6J9 549 aa20.39■□□□□ 0.86
SYNC-201ENST00000373484 HTRA2O43464 458 aaPredicted RBP20.39■□□□□ 0.86
SYNC-201ENST00000373484 AP1G1O43747 822 aa20.39■□□□□ 0.86
SYNC-201ENST00000373484 SNNO75324 88 aaPredicted RBP20.39■□□□□ 0.86
SYNC-201ENST00000373484 RETP07949 1114 aa20.39■□□□□ 0.86
SYNC-201ENST00000373484 SERPINA6P08185 405 aa20.39■□□□□ 0.86
SYNC-201ENST00000373484 TBC1D3HP0C7X1 549 aa20.39■□□□□ 0.86
SYNC-201ENST00000373484 RBL1P28749 1068 aa20.39■□□□□ 0.86
SYNC-201ENST00000373484 CRABP2P29373 138 aa20.39■□□□□ 0.86
SYNC-201ENST00000373484 NIPAL4Q0D2K0 466 aa20.39■□□□□ 0.86
SYNC-201ENST00000373484 THOC5Q13769 683 aaKnown RBP20.39■□□□□ 0.86
SYNC-201ENST00000373484 IHHQ14623 411 aa20.39■□□□□ 0.86
SYNC-201ENST00000373484 KIAA0895LQ68EN5 471 aa20.39■□□□□ 0.86
SYNC-201ENST00000373484 TBC1D3GQ6DHY5 549 aa20.39■□□□□ 0.86
SYNC-201ENST00000373484 TBC1D3CQ6IPX1 549 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms