RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 WASH3PC4AMC7 463 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 SUPT7LO94864 414 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 NNMTP40261 264 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 CPA2P48052 419 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 SHHQ15465 462 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 DUSP6Q16828 381 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 TSPAN33Q86UF1 283 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 CUZD1Q86UP6 607 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 PTGR2Q8N8N7 351 aaPredicted RBP24.8■■□□□ 1.56
CTSA-203ENST00000372459 OSCP1Q8WVF1 389 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 ASIC4Q96FT7 647 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 MCCC1Q96RQ3 725 aaPredicted RBP24.8■■□□□ 1.56
CTSA-203ENST00000372459 SLC30A3Q99726 388 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 CADM1Q9BY67 442 aaKnown RBP24.8■■□□□ 1.56
CTSA-203ENST00000372459 CLPBQ9H078 707 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 WDR55Q9H6Y2 383 aaPredicted RBP24.8■■□□□ 1.56
CTSA-203ENST00000372459 FBXO10Q9UK96 956 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 YBX2Q9Y2T7 364 aaKnown RBP24.8■■□□□ 1.56
CTSA-203ENST00000372459 GOLGA8QA0A0J9YX86 632 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 GOLGA8OA6NCC3 632 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 SYCE1LA8MT33 242 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 GOLGA8NF8WBI6 632 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 UBXN8O00124 270 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 NEMP1O14524 444 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 TRIM24O15164 1050 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 RPS3P23396 243 aaKnown RBP eCLIP24.8■■□□□ 1.568e-9■■□□□ 12
CTSA-203ENST00000372459 NRIP1P48552 1158 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 IL2P60568 153 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 PDCD2Q16342 344 aaPredicted RBP24.8■■□□□ 1.56
CTSA-203ENST00000372459 GEN1Q17RS7 908 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 TMPRSS6Q8IU80 811 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 RBFAQ8N0V3 343 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 CHST14Q8NCH0 376 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 OR2A12Q8NGT7 310 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 N4BP2L2Q92802 583 aaPredicted RBP24.8■■□□□ 1.56
CTSA-203ENST00000372459 RSRC1Q96IZ7 334 aaKnown RBP24.8■■□□□ 1.56
CTSA-203ENST00000372459 LRRC3BQ96PB8 259 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 CCDC28BQ9BUN5 200 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 CXorf56Q9H5V9 222 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 PDE4DIPQ5VU43 2346 aa24.8■■□□□ 1.56
CTSA-203ENST00000372459 TRBV5-4A0A0C4DH59 114 aa24.79■■□□□ 1.56
CTSA-203ENST00000372459 CCDC189A1A4V9 331 aa24.79■■□□□ 1.56
CTSA-203ENST00000372459 GSC2O15499 205 aa24.79■■□□□ 1.56
CTSA-203ENST00000372459 CYP17A1P05093 508 aa24.79■■□□□ 1.56
CTSA-203ENST00000372459 ADH5P11766 374 aa24.79■■□□□ 1.56
CTSA-203ENST00000372459 MTHFD2P13995 350 aa24.79■■□□□ 1.56
CTSA-203ENST00000372459 EPHA3P29320 983 aa24.79■■□□□ 1.56
CTSA-203ENST00000372459 POLR2LP62875 67 aaKnown RBP24.79■■□□□ 1.56
CTSA-203ENST00000372459 GPR33Q49SQ1 333 aa24.79■■□□□ 1.56
CTSA-203ENST00000372459 UNC50Q53HI1 259 aa24.79■■□□□ 1.56
CTSA-203ENST00000372459 LRRC66Q68CR7 880 aa24.79■■□□□ 1.56
CTSA-203ENST00000372459 GDPD4Q6W3E5 623 aa24.79■■□□□ 1.56
CTSA-203ENST00000372459 PPP1R36Q96LQ0 422 aa24.79■■□□□ 1.56
CTSA-203ENST00000372459 SFXN1Q9H9B4 322 aa24.79■■□□□ 1.56
CTSA-203ENST00000372459 CRLS1Q9UJA2 301 aa24.79■■□□□ 1.56
CTSA-203ENST00000372459 SLC8A2Q9UPR5 921 aa24.79■■□□□ 1.56
CTSA-203ENST00000372459 PAPLNO95428 1278 aa24.78■■□□□ 1.56
CTSA-203ENST00000372459 ADH1CP00326 375 aa24.78■■□□□ 1.56
CTSA-203ENST00000372459 GFAPP14136 432 aa24.78■■□□□ 1.56
CTSA-203ENST00000372459 ACRV1P26436 265 aa24.78■■□□□ 1.56
CTSA-203ENST00000372459 CCNG1P51959 295 aa24.78■■□□□ 1.56
CTSA-203ENST00000372459 PFKFB4Q16877 469 aa24.78■■□□□ 1.56
CTSA-203ENST00000372459 LSM12Q3MHD2 195 aaKnown RBP24.78■■□□□ 1.56
CTSA-203ENST00000372459 RPS27LQ71UM5 84 aaKnown RBP24.78■■□□□ 1.56
CTSA-203ENST00000372459 CYB5D2Q8WUJ1 264 aa24.78■■□□□ 1.56
CTSA-203ENST00000372459 MCUR1Q96AQ8 359 aa24.78■■□□□ 1.56
CTSA-203ENST00000372459 ASB2Q96Q27 587 aa24.78■■□□□ 1.56
CTSA-203ENST00000372459 GNPTGQ9UJJ9 305 aa24.78■■□□□ 1.56
CTSA-203ENST00000372459 TMEM233B4DJY2 109 aa24.78■■□□□ 1.56
CTSA-203ENST00000372459 SUPT3HB4E1H0 165 aa24.78■■□□□ 1.56
CTSA-203ENST00000372459 SUPT3HO75486 399 aa24.78■■□□□ 1.56
CTSA-203ENST00000372459 TSPAN12O95859 305 aa24.78■■□□□ 1.56
CTSA-203ENST00000372459 DGKGP49619 791 aa24.78■■□□□ 1.56
CTSA-203ENST00000372459 TSNQ15631 228 aaKnown RBP24.78■■□□□ 1.56
CTSA-203ENST00000372459 CHRNA6Q15825 494 aa24.78■■□□□ 1.56
CTSA-203ENST00000372459 PTRHD1Q6GMV3 140 aaKnown RBP24.78■■□□□ 1.56
CTSA-203ENST00000372459 CMTM5Q96DZ9 223 aa24.78■■□□□ 1.56
CTSA-203ENST00000372459 LINGO1Q96FE5 620 aa24.78■■□□□ 1.56
CTSA-203ENST00000372459 MRGPRX3Q96LB0 322 aa24.78■■□□□ 1.56
CTSA-203ENST00000372459 KLHL32Q96NJ5 620 aa24.78■■□□□ 1.56
CTSA-203ENST00000372459 HEPHQ9BQS7 1158 aa24.78■■□□□ 1.56
CTSA-203ENST00000372459 SARS2Q9NP81 518 aaKnown RBP24.78■■□□□ 1.56
CTSA-203ENST00000372459 DHRS7Q9Y394 339 aa24.78■■□□□ 1.56
CTSA-203ENST00000372459 BTN3A1O00481 513 aa24.77■■□□□ 1.56
CTSA-203ENST00000372459 HOXC11O43248 304 aaPredicted RBP24.77■■□□□ 1.56
CTSA-203ENST00000372459 DCXO43602 365 aa24.77■■□□□ 1.56
CTSA-203ENST00000372459 CHRM1P11229 460 aaPredicted RBP24.77■■□□□ 1.56
CTSA-203ENST00000372459 CLCN7P51798 805 aa24.77■■□□□ 1.56
CTSA-203ENST00000372459 EML3Q32P44 896 aa24.77■■□□□ 1.56
CTSA-203ENST00000372459 FAM13CQ8NE31 585 aa24.77■■□□□ 1.56
CTSA-203ENST00000372459 WFIKKN2Q8TEU8 576 aa24.77■■□□□ 1.56
CTSA-203ENST00000372459 FRS2Q8WU20 508 aa24.77■■□□□ 1.56
CTSA-203ENST00000372459 EEF1AKMT1Q8WVE0 214 aa24.77■■□□□ 1.56
CTSA-203ENST00000372459 MYLIPQ8WY64 445 aa24.77■■□□□ 1.56
CTSA-203ENST00000372459 ANKRD27Q96NW4 1050 aa24.77■■□□□ 1.56
CTSA-203ENST00000372459 C1orf21Q9H246 121 aa24.77■■□□□ 1.56
CTSA-203ENST00000372459 BRD9Q9H8M2 597 aa24.77■■□□□ 1.56
CTSA-203ENST00000372459 IKZF3Q9UKT9 509 aa24.77■■□□□ 1.56
CTSA-203ENST00000372459 NPEPPSL1A6NEC2 478 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 IQCF5A8MTL0 148 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms