RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 PKMP14618 531 aaKnown RBP11.67□□□□□ -0.54
PDE6C-201ENST00000371447 ETS2P15036 469 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 PAX3P23760 479 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 ZNF423Q2M1K9 1284 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 SLC44A4Q53GD3 710 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 SLC8B1Q6J4K2 584 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 CYHR1Q6ZMK1 362 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 MBOAT1Q6ZNC8 495 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 CLYBLQ8N0X4 340 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 ZNF366Q8N895 744 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 GRIN3AQ8TCU5 1115 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 EME1Q96AY2 570 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 CIPCQ9C0C6 399 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 ASB8Q9H765 288 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 BATF3Q9NR55 127 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 CACNA2D2Q9NY47 1150 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 ZNHIT2Q9UHR6 403 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 PHF24Q9UPV7 400 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 H3BNX3 289 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 TRIM24O15164 1050 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 SH3BGRLO75368 114 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 PAPSS2O95340 614 aaPredicted RBP11.67□□□□□ -0.54
PDE6C-201ENST00000371447 ATP5BP06576 529 aaKnown RBP11.67□□□□□ -0.54
PDE6C-201ENST00000371447 GRIA3P42263 894 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 CSRP3P50461 194 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 EPHB3P54753 998 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 NKX3-2P78367 333 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 ANKS6Q68DC2 871 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 AFTPHQ6ULP2 937 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 TSPAN33Q86UF1 283 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 GPSM1Q86YR5 675 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 PQLC1Q8N2U9 271 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 ITFG2Q969R8 447 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 EID2BQ96D98 161 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 ZNF558Q96NG5 402 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 GBP5Q96PP8 586 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 TUBB1Q9H4B7 451 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 HCFC1R1Q9NWW0 138 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 DNAH14Q0VDD8 3507 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 ANGPT2O15123 496 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 CCL16O15467 120 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 TIPRLO75663 272 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 PRAMEF1O95521 474 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 LYNP07948 512 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 NCK1P16333 377 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 ZNF140P52738 457 aaPredicted RBP11.66□□□□□ -0.54
PDE6C-201ENST00000371447 IL2P60568 153 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 MRPS35P82673 323 aaKnown RBP11.66□□□□□ -0.54
PDE6C-201ENST00000371447 PIGGQ5H8A4 983 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 PGAM4Q8N0Y7 254 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 LILRA2Q8N149 483 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 SLC43A3Q8NBI5 491 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 LRTOMTQ8WZ04 291 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 TRIB3Q96RU7 358 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 MED16Q9Y2X0 877 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 SCN5AQ14524 2016 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 ILVBLA1L0T0 632 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 NRP2O60462 931 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 CD160O95971 181 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 VCLP18206 1134 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 FOLH1Q04609 750 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 STX5Q13190 355 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 TIGD2Q4W5G0 525 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 KBTBD6Q86V97 674 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 RETREG3Q86VR2 466 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 CCDC117Q8IWD4 279 aaPredicted RBP11.66□□□□□ -0.54
PDE6C-201ENST00000371447 FUBP1Q96AE4 644 aaKnown RBP11.66□□□□□ -0.54
PDE6C-201ENST00000371447 ASIC4Q96FT7 647 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 TEX37Q96LM6 180 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 RANBP9Q96S59 729 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 CCDC28BQ9BUN5 200 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 MTG2Q9H4K7 406 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 CWH43Q9H720 699 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 ELAC1Q9H777 363 aaKnown RBP11.66□□□□□ -0.54
PDE6C-201ENST00000371447 NOL11Q9H8H0 719 aaKnown RBP11.66□□□□□ -0.54
PDE6C-201ENST00000371447 NLE1Q9NVX2 485 aaPredicted RBP11.66□□□□□ -0.54
PDE6C-201ENST00000371447 SLAMF8Q9P0V8 285 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 PRUNE2Q8WUY3 3088 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 MIA3Q5JRA6 1907 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 A0A1W2PQ67 120 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 AKAP10O43572 662 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 PYGLP06737 847 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 CCL5P13501 91 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 HSPA7P48741 367 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 DNAJB13P59910 316 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 TAF1AQ15573 450 aaPredicted RBP11.66□□□□□ -0.54
PDE6C-201ENST00000371447 MTX3Q5HYI7 312 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 IRGCQ6NXR0 463 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 SPPL2CQ8IUH8 684 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 KLHDC8BQ8IXV7 354 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 FNDC5Q8NAU1 212 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 CIB1Q99828 191 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 NSUN3Q9H649 340 aaKnown RBP11.66□□□□□ -0.54
PDE6C-201ENST00000371447 SYTL2Q9HCH5 934 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 CROTQ9UKG9 612 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 USP22Q9UPT9 525 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 PCDHGA7Q9Y5G6 932 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 NLRC5Q86WI3 1866 aa11.66□□□□□ -0.54
PDE6C-201ENST00000371447 MYOFQ9NZM1 2061 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 SAC3D1A6NKF1 404 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms