RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 SEMA4GQ9NTN9 838 aa7.01□□□□□ -1.29
USP1-202ENST00000371146 MKL2Q9ULH7 1088 aa7.01□□□□□ -1.29
USP1-202ENST00000371146 PCDHA3Q9Y5H8 950 aa7.01□□□□□ -1.29
USP1-202ENST00000371146 ARID1BQ8NFD5 2236 aaPredicted RBP7.01□□□□□ -1.29
USP1-202ENST00000371146 RHPN2P1A8MT19 583 aa7□□□□□ -1.29
USP1-202ENST00000371146 ZNF217O75362 1048 aa7□□□□□ -1.29
USP1-202ENST00000371146 METTL18O95568 372 aa7□□□□□ -1.29
USP1-202ENST00000371146 CD38P28907 300 aa7□□□□□ -1.29
USP1-202ENST00000371146 P2RY2P41231 377 aa7□□□□□ -1.29
USP1-202ENST00000371146 CD97P48960 835 aa7□□□□□ -1.29
USP1-202ENST00000371146 MAPKAPK2P49137 400 aa7□□□□□ -1.29
USP1-202ENST00000371146 CARSP49589 748 aaKnown RBP7□□□□□ -1.29
USP1-202ENST00000371146 CLCN5P51795 746 aa7□□□□□ -1.29
USP1-202ENST00000371146 EPHA5P54756 1037 aa7□□□□□ -1.29
USP1-202ENST00000371146 LRP8Q14114 963 aa7□□□□□ -1.29
USP1-202ENST00000371146 KIF19Q2TAC6 998 aa7□□□□□ -1.29
USP1-202ENST00000371146 C11orf63Q6NUN7 778 aa7□□□□□ -1.29
USP1-202ENST00000371146 MSANTD2Q6P1R3 559 aa7□□□□□ -1.29
USP1-202ENST00000371146 TTC23LQ6PF05 361 aa7□□□□□ -1.29
USP1-202ENST00000371146 PARGQ86W56 976 aa7□□□□□ -1.29
USP1-202ENST00000371146 RNF10Q8N5U6 811 aaKnown RBP7□□□□□ -1.29
USP1-202ENST00000371146 PQLC3Q8N755 202 aa7□□□□□ -1.29
USP1-202ENST00000371146 OR13H1Q8NG92 308 aa7□□□□□ -1.29
USP1-202ENST00000371146 PHPT1Q9NRX4 125 aaPredicted RBP7□□□□□ -1.29
USP1-202ENST00000371146 IARS2Q9NSE4 1012 aaKnown RBP7□□□□□ -1.29
USP1-202ENST00000371146 MTRF1LQ9UGC7 380 aaKnown RBP7□□□□□ -1.29
USP1-202ENST00000371146 EBF1Q9UH73 591 aa7□□□□□ -1.29
USP1-202ENST00000371146 NFU1Q9UMS0 254 aa7□□□□□ -1.29
USP1-202ENST00000371146 CNTN6Q9UQ52 1028 aa7□□□□□ -1.29
USP1-202ENST00000371146 C15orf41Q9Y2V0 281 aa7□□□□□ -1.29
USP1-202ENST00000371146 PLEKHM1Q9Y4G2 1056 aa7□□□□□ -1.29
USP1-202ENST00000371146 ARIH1Q9Y4X5 557 aaPredicted RBP7□□□□□ -1.29
USP1-202ENST00000371146 WDR91A4D1P6 747 aa7□□□□□ -1.29
USP1-202ENST00000371146 CFAP99D6REC4 459 aa7□□□□□ -1.29
USP1-202ENST00000371146 APOC4-APOC2K7ER74 178 aa7□□□□□ -1.29
USP1-202ENST00000371146 PSTPIP1O43586 416 aa7□□□□□ -1.29
USP1-202ENST00000371146 APOC2P02655 101 aa7□□□□□ -1.29
USP1-202ENST00000371146 CYP2A6P11509 494 aaPredicted RBP7□□□□□ -1.29
USP1-202ENST00000371146 S100A1P23297 94 aa7□□□□□ -1.29
USP1-202ENST00000371146 HNF1BP35680 557 aa7□□□□□ -1.29
USP1-202ENST00000371146 GRIA3P42263 894 aa7□□□□□ -1.29
USP1-202ENST00000371146 GLRBP48167 497 aa7□□□□□ -1.29
USP1-202ENST00000371146 GEMP55040 296 aa7□□□□□ -1.29
USP1-202ENST00000371146 TUBA4AP68366 448 aa7□□□□□ -1.29
USP1-202ENST00000371146 CKAP4Q07065 602 aaKnown RBP7□□□□□ -1.29
USP1-202ENST00000371146 SLC9A5Q14940 896 aa7□□□□□ -1.29
USP1-202ENST00000371146 TRADDQ15628 312 aa7□□□□□ -1.29
USP1-202ENST00000371146 ZNF805Q5CZA5 627 aa7□□□□□ -1.29
USP1-202ENST00000371146 EXOC3L1Q86VI1 746 aa7□□□□□ -1.29
USP1-202ENST00000371146 PCDH20Q8N6Y1 951 aaKnown RBP7□□□□□ -1.29
USP1-202ENST00000371146 CCL4L1Q8NHW4 92 aa7□□□□□ -1.29
USP1-202ENST00000371146 C1orf74Q96LT6 269 aa7□□□□□ -1.29
USP1-202ENST00000371146 TCF12Q99081 682 aa7□□□□□ -1.29
USP1-202ENST00000371146 SLC38A3Q99624 504 aa7□□□□□ -1.29
USP1-202ENST00000371146 CHRDQ9H2X0 955 aa7□□□□□ -1.29
USP1-202ENST00000371146 ACTR5Q9H9F9 607 aaPredicted RBP7□□□□□ -1.29
USP1-202ENST00000371146 SLC40A1Q9NP59 571 aa7□□□□□ -1.29
USP1-202ENST00000371146 THAP10Q9P2Z0 257 aaPredicted RBP7□□□□□ -1.29
USP1-202ENST00000371146 WNT9AO14904 365 aa7□□□□□ -1.29
USP1-202ENST00000371146 PJA2O43164 708 aa7□□□□□ -1.29
USP1-202ENST00000371146 KDELR3O43731 214 aa7□□□□□ -1.29
USP1-202ENST00000371146 ERVK-10P10266 1014 aa7□□□□□ -1.29
USP1-202ENST00000371146 RALBP11234 206 aa7□□□□□ -1.29
USP1-202ENST00000371146 ITGALP20701 1170 aa7□□□□□ -1.29
USP1-202ENST00000371146 PTPN3P26045 913 aa7□□□□□ -1.29
USP1-202ENST00000371146 MC4RP32245 332 aa7□□□□□ -1.29
USP1-202ENST00000371146 CCT5P48643 541 aa7□□□□□ -1.29
USP1-202ENST00000371146 ST13P50502 369 aaKnown RBP7□□□□□ -1.29
USP1-202ENST00000371146 PLOD1Q02809 727 aaPredicted RBP7□□□□□ -1.29
USP1-202ENST00000371146 SLC25A11Q02978 314 aaKnown RBP7□□□□□ -1.29
USP1-202ENST00000371146 CYTH1Q15438 398 aa7□□□□□ -1.29
USP1-202ENST00000371146 KLHDC10Q6PID8 442 aa7□□□□□ -1.29
USP1-202ENST00000371146 TMEM220Q6QAJ8 160 aa7□□□□□ -1.29
USP1-202ENST00000371146 BHLHA9Q7RTU4 235 aa7□□□□□ -1.29
USP1-202ENST00000371146 SFTPA2Q8IWL1 248 aa7□□□□□ -1.29
USP1-202ENST00000371146 UNC5BQ8IZJ1 945 aa7□□□□□ -1.29
USP1-202ENST00000371146 TMCO5AQ8N6Q1 288 aa7□□□□□ -1.29
USP1-202ENST00000371146 PPHLN1Q8NEY8 458 aaKnown RBP7□□□□□ -1.29
USP1-202ENST00000371146 ELMO1Q92556 727 aa7□□□□□ -1.29
USP1-202ENST00000371146 MAML1Q92585 1016 aa7□□□□□ -1.29
USP1-202ENST00000371146 FOXJ1Q92949 421 aa7□□□□□ -1.29
USP1-202ENST00000371146 MFSD3Q96ES6 412 aa7□□□□□ -1.29
USP1-202ENST00000371146 ZNF670Q9BS34 389 aa7□□□□□ -1.29
USP1-202ENST00000371146 LRRC1Q9BTT6 524 aa7□□□□□ -1.29
USP1-202ENST00000371146 MLXIPLQ9NP71 852 aa7□□□□□ -1.29
USP1-202ENST00000371146 FBXO6Q9NRD1 293 aaPredicted RBP7□□□□□ -1.29
USP1-202ENST00000371146 TM7SF3Q9NS93 570 aa7□□□□□ -1.29
USP1-202ENST00000371146 FKBP14Q9NWM8 211 aa7□□□□□ -1.29
USP1-202ENST00000371146 SLC17A6Q9P2U8 582 aa7□□□□□ -1.29
USP1-202ENST00000371146 KLQ9UEF7 1012 aa7□□□□□ -1.29
USP1-202ENST00000371146 MBD1Q9UIS9 605 aaPredicted RBP7□□□□□ -1.29
USP1-202ENST00000371146 ASF1AQ9Y294 204 aa7□□□□□ -1.29
USP1-202ENST00000371146 FREM2Q5SZK8 3169 aa6.99□□□□□ -1.29
USP1-202ENST00000371146 UPK3BL1B0FP48 263 aa6.99□□□□□ -1.29
USP1-202ENST00000371146 UPK3BL2E5RIL1 263 aa6.99□□□□□ -1.29
USP1-202ENST00000371146 K7ESM1 405 aa6.99□□□□□ -1.29
USP1-202ENST00000371146 OPHN1O60890 802 aa6.99□□□□□ -1.29
USP1-202ENST00000371146 KATNA1O75449 491 aa6.99□□□□□ -1.29
USP1-202ENST00000371146 PRAMEF1O95521 474 aa6.99□□□□□ -1.29
USP1-202ENST00000371146 ALAS2P22557 587 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms