RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 VARSP26640 1264 aaKnown RBP12.63□□□□□ -0.39
GPC4-201ENST00000370828 GPR180Q86V85 440 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 TTC29Q8NA56 475 aaPredicted RBP12.63□□□□□ -0.39
GPC4-201ENST00000370828 PRICKLE1Q96MT3 831 aaPredicted RBP12.63□□□□□ -0.39
GPC4-201ENST00000370828 PRDM5Q9NQX1 630 aaPredicted RBP12.63□□□□□ -0.39
GPC4-201ENST00000370828 STARD7Q9NQZ5 370 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 TNPO3Q9Y5L0 923 aaKnown RBP12.63□□□□□ -0.39
GPC4-201ENST00000370828 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.63□□□□□ -0.39
GPC4-201ENST00000370828 FAM172BPA6NC97 362 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 CBX4O00257 560 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 PLK4O00444 970 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 CRTAPO75718 401 aaPredicted RBP12.63□□□□□ -0.39
GPC4-201ENST00000370828 RNASEH2AO75792 299 aaKnown RBP12.63□□□□□ -0.39
GPC4-201ENST00000370828 OR7A10O76100 309 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 ITGB5P18084 799 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 MSR1P21757 451 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 PIK3CGP48736 1102 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 ZNF177Q13360 481 aaPredicted RBP12.63□□□□□ -0.39
GPC4-201ENST00000370828 SMCO1Q147U7 214 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 OCLNQ16625 522 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 PTPRNQ16849 979 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 GPR158Q5T848 1215 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 ARMC6Q6NXE6 501 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 ZNF517Q6ZMY9 492 aaPredicted RBP12.63□□□□□ -0.39
GPC4-201ENST00000370828 MED8Q96G25 268 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 BIRC8Q96P09 236 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 PORCNQ9H237 461 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 SNTG1Q9NSN8 517 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 MCUBQ9NWR8 336 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.63□□□□□ -0.39
GPC4-201ENST00000370828 PRAMEF33A0A0G2JMD5 474 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 PRAMEF10O60809 474 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 RAMP2O60895 175 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 CST3P01034 146 aaPredicted RBP12.63□□□□□ -0.39
GPC4-201ENST00000370828 SLC15A1P46059 708 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 GPR15P49685 360 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 MTPNP58546 118 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 TBC1D25Q3MII6 688 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 FAM180AQ6UWF9 173 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 MACC1Q6ZN28 852 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 NKAPQ8N5F7 415 aaKnown RBP12.63□□□□□ -0.39
GPC4-201ENST00000370828 ZNF614Q8N883 585 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 OR10A6Q8NH74 314 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 SNX27Q96L92 541 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 INTS10Q9NVR2 710 aaKnown RBP12.63□□□□□ -0.39
GPC4-201ENST00000370828 DMAC2Q9NW81 257 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 NFKBIL1Q9UBC1 381 aaPredicted RBP12.63□□□□□ -0.39
GPC4-201ENST00000370828 ERVK-11Q9UQG0 969 aa12.63□□□□□ -0.39
GPC4-201ENST00000370828 RPH3AQ9Y2J0 694 aaPredicted RBP12.63□□□□□ -0.39
GPC4-201ENST00000370828 UBE2QL1A1L167 161 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 F5H5T6 163 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 H3BNH8 94 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 MFSD11O43934 449 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 PSKH1P11801 424 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 AP1S2P56377 157 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 MAXP61244 160 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 RBM48Q5RL73 367 aaKnown RBP12.62□□□□□ -0.39
GPC4-201ENST00000370828 TMEM236Q5W0B7 351 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 NIPA1Q7RTP0 329 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 ERMP1Q7Z2K6 904 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 SLC43A3Q8NBI5 491 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 IL31RAQ8NI17 732 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 LRRC15Q8TF66 581 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 C11orf24Q96F05 449 aaPredicted RBP12.62□□□□□ -0.39
GPC4-201ENST00000370828 ZDHHC15Q96MV8 337 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 TMEM246Q9BRR3 403 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 YTHDF1Q9BYJ9 559 aaKnown RBP12.62□□□□□ -0.39
GPC4-201ENST00000370828 METTL21EPA6NDL7 271 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 KPNA3O00505 521 aaPredicted RBP12.62□□□□□ -0.39
GPC4-201ENST00000370828 ARPC2O15144 300 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 TULP3O75386 442 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 CLTBP09497 229 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 HOXC8P31273 242 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 COTL1Q14019 142 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 CPSF6Q16630 551 aaKnown RBP eCLIP12.62□□□□□ -0.39
GPC4-201ENST00000370828 NDUFAF6Q330K2 333 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 HSD17B12Q53GQ0 312 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 USP43Q70EL4 1123 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.62□□□□□ -0.39
GPC4-201ENST00000370828 LDB1Q86U70 411 aaPredicted RBP12.62□□□□□ -0.39
GPC4-201ENST00000370828 LZTR1Q8N653 840 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 DENND1AQ8TEH3 1009 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 CAMKK2Q96RR4 588 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 GSDMCQ9BYG8 508 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 SUCOQ9UBS9 1254 aaKnown RBP12.62□□□□□ -0.39
GPC4-201ENST00000370828 FABP12A6NFH5 140 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 PIP5K1BO14986 540 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 HSF2Q03933 536 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 VEPH1Q14D04 833 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 MEP1AQ16819 746 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 CHSY3Q70JA7 882 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 SPATA19Q7Z5L4 167 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 SLC12A8A0AV02 714 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 hCG_2039718K7EN88 272 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 SLC22A2O15244 555 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 SUV39H1O43463 412 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 OR10H3O60404 316 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 PGRP06401 933 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 COL6A1P12109 1028 aa12.62□□□□□ -0.39
GPC4-201ENST00000370828 ADRA2BP18089 450 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms