RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 TRIM51Q9BSJ1 452 aa14.7□□□□□ -0.06
COL9A1-204ENST00000370496 DUSP23Q9BVJ7 150 aa14.7□□□□□ -0.06
COL9A1-204ENST00000370496 OR2AG1Q9H205 316 aa14.7□□□□□ -0.06
COL9A1-204ENST00000370496 ASB8Q9H765 288 aa14.7□□□□□ -0.06
COL9A1-204ENST00000370496 XAB2Q9HCS7 855 aaKnown RBP14.7□□□□□ -0.06
COL9A1-204ENST00000370496 SMOXQ9NWM0 555 aa14.7□□□□□ -0.06
COL9A1-204ENST00000370496 CDC23Q9UJX2 597 aa14.7□□□□□ -0.06
COL9A1-204ENST00000370496 GPSM3Q9Y4H4 160 aa14.7□□□□□ -0.06
COL9A1-204ENST00000370496 CSNK1G3Q9Y6M4 447 aa14.7□□□□□ -0.06
COL9A1-204ENST00000370496 BPTFQ12830 3046 aa14.7□□□□□ -0.06
COL9A1-204ENST00000370496 MROH6A6NGR9 719 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 LMO7DNF2Z398 122 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 GAPDHSO14556 408 aaPredicted RBP14.69□□□□□ -0.06
COL9A1-204ENST00000370496 DNALI1O14645 258 aaPredicted RBP14.69□□□□□ -0.06
COL9A1-204ENST00000370496 MTX2O75431 263 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 KCNK5O95279 499 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 CEACAM1P13688 526 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 ADRA1DP25100 572 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 MGAT1P26572 445 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 NPY2RP49146 381 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 CRADDP78560 199 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 ILF3Q12906 894 aaKnown RBP eCLIP14.69□□□□□ -0.06
COL9A1-204ENST00000370496 NFATC2Q13469 925 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 WHAMMP3Q1A5X7 153 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 SKIDA1Q1XH10 827 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 ZRANB3Q5FWF4 1079 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 PPM1JQ5JR12 505 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 LDLRAP1Q5SW96 308 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 ZNF648Q5T619 568 aaPredicted RBP14.69□□□□□ -0.06
COL9A1-204ENST00000370496 DBX2Q6ZNG2 339 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 NLRP9Q7RTR0 991 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 DGLUCYQ7Z3D6 616 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 TAF8Q7Z7C8 310 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 PCGF5Q86SE9 256 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 BAHD1Q8TBE0 780 aaPredicted RBP14.69□□□□□ -0.06
COL9A1-204ENST00000370496 ZNF398Q8TD17 642 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 PTCD2Q8WV60 388 aaKnown RBP14.69□□□□□ -0.06
COL9A1-204ENST00000370496 SCG3Q8WXD2 468 aaKnown RBP14.69□□□□□ -0.06
COL9A1-204ENST00000370496 ULK4Q96C45 1275 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 CNDP2Q96KP4 475 aaKnown RBP14.69□□□□□ -0.06
COL9A1-204ENST00000370496 TTC25Q96NG3 672 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 GSDMCQ9BYG8 508 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 CLPBQ9H078 707 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 TMEM168Q9H0V1 697 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 RMI1Q9H9A7 625 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 TRIM39Q9HCM9 518 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 SYBUQ9NX95 663 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 ATXN10Q9UBB4 475 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 ZNHIT2Q9UHR6 403 aa14.69□□□□□ -0.06
COL9A1-204ENST00000370496 GPR89AB7ZAQ6 455 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 TRIM38O00635 465 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 SIGLEC6O43699 453 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 UGT1A9O60656 530 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 CBFA2T3O75081 653 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 GPR89BP0CG08 455 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 UGT1A6P19224 532 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 UGT1A1P22309 533 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 UGT1A4P22310 534 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 UGT1A3P35503 534 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 UGT1A5P35504 534 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 PRAMEP78395 509 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 DAB2P98082 770 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 XIAPP98170 497 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 PEX6Q13608 980 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 TRIP6Q15654 476 aaKnown RBP14.68□□□□□ -0.06
COL9A1-204ENST00000370496 PCID2Q5JVF3 399 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 GPRC6AQ5T6X5 926 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 TSTD2Q5T7W7 516 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 RNASEH2BQ5TBB1 312 aaKnown RBP14.68□□□□□ -0.06
COL9A1-204ENST00000370496 ZCCHC8Q6NZY4 707 aaKnown RBP14.68□□□□□ -0.06
COL9A1-204ENST00000370496 CASC4Q6P4E1 433 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 CRTC3Q6UUV7 619 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 SNX20Q7Z614 316 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 TRAPPC5Q8IUR0 188 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 NAT8LQ8N9F0 302 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 MCUQ8NE86 351 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 DDHD1Q8NEL9 900 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 KIF18AQ8NI77 898 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.68□□□□□ -0.06
COL9A1-204ENST00000370496 SERPINB12Q96P63 405 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 TRIM31Q9BZY9 425 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 UGT1A7Q9HAW7 530 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 UGT1A10Q9HAW8 530 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 UGT1A8Q9HAW9 530 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 EVA1BQ9NVM1 165 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 TRNAU1APQ9NX07 287 aaKnown RBP14.68□□□□□ -0.06
COL9A1-204ENST00000370496 SAMD15Q9P1V8 674 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 TMPRSS11EQ9UL52 423 aa14.68□□□□□ -0.06
COL9A1-204ENST00000370496 ZFC3H1O60293 1989 aaKnown RBP14.68□□□□□ -0.06
COL9A1-204ENST00000370496 SPAARA0A1B0GVQ0 90 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 H7C0S8 307 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 GIPC1O14908 333 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 GRID2O43424 1007 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 VEGFDO43915 354 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 NUAK1O60285 661 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 DNAJC6O75061 913 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 AVILO75366 819 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 CDK14O94921 469 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 LDOC1O95751 146 aaPredicted RBP14.67□□□□□ -0.06
COL9A1-204ENST00000370496 MLNP12872 115 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms