RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 ZNF567Q8N184 647 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 ZNF781Q8N8C0 355 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 OR52L1Q8NGH7 329 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 PCDH19Q8TAB3 1148 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 SLC9A6Q92581 669 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 ITCHQ96J02 903 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 MRPL57Q9BQC6 102 aaKnown RBP8.53□□□□□ -1.04
LCA5-201ENST00000369846 FUZQ9BT04 418 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 UBQLN2Q9UHD9 624 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 RAB23Q9ULC3 237 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 PIN4Q9Y237 131 aaKnown RBP8.53□□□□□ -1.04
LCA5-201ENST00000369846 SMIM30A4D0T7 59 aa8.52□□□□□ -1.04
LCA5-201ENST00000369846 ANKRD63C9JTQ0 380 aa8.52□□□□□ -1.04
LCA5-201ENST00000369846 DBIP07108 87 aaKnown RBP8.52□□□□□ -1.04
LCA5-201ENST00000369846 STOMP27105 288 aa8.52□□□□□ -1.04
LCA5-201ENST00000369846 AP3S2P59780 193 aa8.52□□□□□ -1.04
LCA5-201ENST00000369846 CBLBQ13191 982 aa8.52□□□□□ -1.04
LCA5-201ENST00000369846 ATXN7L3Q14CW9 347 aaPredicted RBP8.52□□□□□ -1.04
LCA5-201ENST00000369846 IDNKQ5T6J7 187 aa8.52□□□□□ -1.04
LCA5-201ENST00000369846 RNF44Q7L0R7 432 aa8.52□□□□□ -1.04
LCA5-201ENST00000369846 MMAAQ8IVH4 418 aaKnown RBP8.52□□□□□ -1.04
LCA5-201ENST00000369846 OR8K3Q8NH51 312 aa8.52□□□□□ -1.04
LCA5-201ENST00000369846 STOML3Q8TAV4 291 aa8.52□□□□□ -1.04
LCA5-201ENST00000369846 PPP1R13LQ8WUF5 828 aa8.52□□□□□ -1.04
LCA5-201ENST00000369846 TDRD3Q9H7E2 651 aaKnown RBP8.52□□□□□ -1.04
LCA5-201ENST00000369846 MINPP1Q9UNW1 487 aa8.52□□□□□ -1.04
LCA5-201ENST00000369846 GAKO14976 1311 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 A0A087X1B8 175 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 MOXD2PA6NHM9 499 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 INMT-MINDY4F8WBC2 141 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 INMTO95050 263 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 CDRT1O95170 752 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 AMHP03971 560 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 VEGFAP15692 232 aaPredicted RBP8.52□□□□□ -1.05
LCA5-201ENST00000369846 TSHRP16473 764 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 CRHR1P34998 444 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 IDH3AP50213 366 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 TUBP50607 506 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 RHDQ02161 417 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 FGFBP1Q14512 234 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 STK11Q15831 433 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 PABPC1LQ4VXU2 614 aaKnown RBP8.52□□□□□ -1.05
LCA5-201ENST00000369846 USP45Q70EL2 814 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 GALNTL5Q7Z4T8 443 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 ENDOVQ8N8Q3 282 aaKnown RBP8.52□□□□□ -1.05
LCA5-201ENST00000369846 ANKRD52Q8NB46 1076 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 GALNT11Q8NCW6 608 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 ZNF486Q96H40 463 aaPredicted RBP8.52□□□□□ -1.05
LCA5-201ENST00000369846 SLC30A2Q9BRI3 323 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 SYNDIG1Q9H7V2 258 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 TAS2R7Q9NYW3 318 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 CDC14AQ9UNH5 594 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 DYRK1BQ9Y463 629 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 PCDHA11Q9Y5I1 949 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 MRC1P22897 1456 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 LTN1O94822 1766 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 TRAV6A0A075B6T7 132 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 ANKDD1BA6NHY2 528 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 CPSF4LA6NMK7 179 aaKnown RBP8.52□□□□□ -1.05
LCA5-201ENST00000369846 BBIP1A8MTZ0 92 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 SSX5O60225 188 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 IL7RP16871 459 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 ARFIP1P53367 373 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 GRK1Q15835 563 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 TMEM198Q66K66 360 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 MTFR2Q6P444 385 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 SLC30A10Q6XR72 485 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 PAQR7Q86WK9 346 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 CADM2Q8N3J6 435 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 INO80EQ8NBZ0 244 aaPredicted RBP8.52□□□□□ -1.05
LCA5-201ENST00000369846 STON2Q8WXE9 905 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 FBXL20Q96IG2 436 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 TBCBQ99426 244 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 ANKEF1Q9NU02 776 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 RAB19A4D1S5 217 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 SMAD9O15198 467 aaKnown RBP8.52□□□□□ -1.05
LCA5-201ENST00000369846 ITGAVP06756 1048 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 PBLDP30039 288 aaPredicted RBP8.52□□□□□ -1.05
LCA5-201ENST00000369846 LCN1P31025 176 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 MAGEA6P43360 314 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 GPX6P59796 221 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 RAB10P61026 200 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 RPS3AP61247 264 aaKnown RBP8.52□□□□□ -1.05
LCA5-201ENST00000369846 CPSF6Q16630 551 aaKnown RBP eCLIP8.52□□□□□ -1.05
LCA5-201ENST00000369846 C4orf46Q504U0 113 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 BRMS1LQ5PSV4 323 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 MARC1Q5VT66 337 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 RPTNQ6XPR3 784 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 FAM196AQ6ZSG2 479 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 IRF2BP2Q7Z5L9 587 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 RASGEF1CQ8N431 466 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 TRUB1Q8WWH5 349 aaKnown RBP8.52□□□□□ -1.05
LCA5-201ENST00000369846 REPS1Q96D71 796 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 SPATA33Q96N06 139 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 SSX3Q99909 188 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 GATA5Q9BWX5 397 aaPredicted RBP8.52□□□□□ -1.05
LCA5-201ENST00000369846 CYP3A43Q9HB55 503 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 ADAM28Q9UKQ2 775 aa8.52□□□□□ -1.05
LCA5-201ENST00000369846 CNOT6Q9ULM6 557 aaKnown RBP8.52□□□□□ -1.05
LCA5-201ENST00000369846 SAMD4AQ9UPU9 718 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms