RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 MINDY4Q4G0A6 757 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 ZCWPW2Q504Y3 356 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 TCEAL5Q5H9L2 206 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 TSTD2Q5T7W7 516 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 SERPINA9Q86WD7 417 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 NIPA2Q8N8Q9 360 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 SNED1Q8TER0 1413 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 PCDHGA11Q9Y5H2 935 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 HEPACAMQ14CZ8 416 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 DPYSL2Q16555 572 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 CHST15Q7LFX5 561 aaPredicted RBP9.79□□□□□ -0.84
SCAF11-202ENST00000369367 TMEM110Q86TL2 294 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 LRRTM4Q86VH4 590 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 DCAF4L2Q8NA75 395 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 KCTD4Q8WVF5 259 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 HHATLQ9HCP6 504 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 IGSF9Q9P2J2 1179 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 XPR1Q9UBH6 696 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 RAB21Q9UL25 225 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 H7C0S8 307 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 MGRN1O60291 552 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 CCDC159P0C7I6 412 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 GNAZP19086 355 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 SLC6A2P23975 617 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 ITPKBP27987 946 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 CDKN2BP42772 138 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 HADHBP55084 474 aaKnown RBP9.79□□□□□ -0.84
SCAF11-202ENST00000369367 PRR5P85299 388 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 PLA2G4EQ3MJ16 856 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 ZNF563Q8TA94 476 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 DDX18Q9NVP1 670 aaKnown RBP9.79□□□□□ -0.84
SCAF11-202ENST00000369367 LATS1O95835 1130 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 ALPIP09923 528 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 MAT2AP31153 395 aaKnown RBP9.79□□□□□ -0.84
SCAF11-202ENST00000369367 CSTF2P33240 577 aaKnown RBP eCLIP9.79□□□□□ -0.845e-9■■■■□ 25.1
SCAF11-202ENST00000369367 BNIP2Q12982 314 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 TMED1Q13445 227 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 NAE1Q13564 534 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 LARS2Q15031 903 aaKnown RBP9.79□□□□□ -0.84
SCAF11-202ENST00000369367 TEAD2Q15562 447 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 NEK10Q6ZWH5 1172 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 EIF3MQ7L2H7 374 aaKnown RBP9.79□□□□□ -0.84
SCAF11-202ENST00000369367 RASSF5Q8WWW0 418 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 PSMG2Q969U7 264 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 BTBD9Q96Q07 612 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 RERGLQ9H628 205 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 PCDHGC4Q9Y5F7 938 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 RFXANKO14593 260 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 B3GALT2O43825 422 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 VEGFDO43915 354 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 SLC1A5Q15758 541 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 RNASEH2BQ5TBB1 312 aaKnown RBP9.79□□□□□ -0.84
SCAF11-202ENST00000369367 ERICH5Q6P6B1 374 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 ENPP7Q6UWV6 458 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 ANKRD7Q92527 254 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 TEKT5Q96M29 485 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 FCRL5Q96RD9 977 aa9.79□□□□□ -0.84
SCAF11-202ENST00000369367 CARS2Q9HA77 564 aaKnown RBP9.79□□□□□ -0.84
SCAF11-202ENST00000369367 KLHL33A6NCF5 533 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 IFNGP01579 166 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 NTRK1P04629 796 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 CYBAP13498 195 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 VIPR1P32241 457 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 TYW3Q6IPR3 259 aaKnown RBP9.78□□□□□ -0.84
SCAF11-202ENST00000369367 ZNF786Q8N393 782 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 ZNF384Q8TF68 577 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 C12orf66Q96MD2 445 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 GTPBP2Q9BX10 602 aaKnown RBP9.78□□□□□ -0.84
SCAF11-202ENST00000369367 COQ6Q9Y2Z9 468 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 CRYBG1Q9Y4K1 1723 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 UPK3BL1B0FP48 263 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 UPK3BL2E5RIL1 263 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 LDOC1O95751 146 aaPredicted RBP9.78□□□□□ -0.84
SCAF11-202ENST00000369367 ZNF844Q08AG5 666 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 AP1ARQ63HQ0 302 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 TXNDC8Q6A555 127 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 FAM92BQ6ZTR7 304 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 SLC9B2Q86UD5 537 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 APLFQ8IW19 511 aaPredicted RBP9.78□□□□□ -0.84
SCAF11-202ENST00000369367 ZC3H7AQ8IWR0 971 aaKnown RBP9.78□□□□□ -0.84
SCAF11-202ENST00000369367 FOXJ1Q92949 421 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 RNFT2Q96EX2 444 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 PCDHB18PQ96TA0 734 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 SH3GL3Q99963 347 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 ZNF229Q9UJW7 825 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 PCDHB3Q9Y5E6 796 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 PHRF1Q9P1Y6 1649 aaKnown RBP9.78□□□□□ -0.84
SCAF11-202ENST00000369367 BBIP1A8MTZ0 92 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 VSTM5A8MXK1 200 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 EDNRBP24530 442 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 GBE1Q04446 702 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 KLHDC7BQ96G42 594 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 ART5Q96L15 291 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 HERC2P3Q9BVR0 1158 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 CFL2Q9Y281 166 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 PEX11AO75192 247 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 TYRP14679 529 aa9.78□□□□□ -0.84
SCAF11-202ENST00000369367 RPL4P36578 427 aaKnown RBP9.78□□□□□ -0.84
SCAF11-202ENST00000369367 TRIM71Q2Q1W2 868 aaKnown RBP9.78□□□□□ -0.84
SCAF11-202ENST00000369367 SNX32Q86XE0 403 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms