RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 DCP2Q8IU60 420 aaKnown RBP13.78□□□□□ -0.2
TPM3-211ENST00000368531 HID1Q8IV36 788 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 IFT20Q8IY31 132 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 ZBED8Q8IZ13 594 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 SEC14L1Q92503 715 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 EBNA1BP2Q99848 306 aaKnown RBP13.78□□□□□ -0.2
TPM3-211ENST00000368531 GAREM1Q9H706 876 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 IL21RQ9HBE5 538 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 CYP4F12Q9HCS2 524 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 RRAGDQ9NQL2 400 aaPredicted RBP13.78□□□□□ -0.2
TPM3-211ENST00000368531 RXFP3Q9NSD7 469 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 ZDHHC18Q9NUE0 388 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 KLQ9UEF7 1012 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.78□□□□□ -0.2
TPM3-211ENST00000368531 RIMKLBQ9ULI2 386 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 V9GYY5 206 aaPredicted RBP13.78□□□□□ -0.2
TPM3-211ENST00000368531 LRP4O75096 1905 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 LNP1A1A4G5 178 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 H7C0S8 307 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 SDC3O75056 442 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 PGAM1P18669 254 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 PAMP19021 973 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 KELP23276 732 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 AKT1P31749 480 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 FOXN2P32314 431 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 SRP54P61011 504 aaKnown RBP13.77□□□□□ -0.21
TPM3-211ENST00000368531 ACVR1Q04771 509 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 CACNG1Q06432 222 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 ALG11Q2TAA5 492 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 AASDHQ4L235 1098 aaPredicted RBP13.77□□□□□ -0.21
TPM3-211ENST00000368531 KHDC1Q4VXA5 237 aaKnown RBP13.77□□□□□ -0.21
TPM3-211ENST00000368531 FASTKD1Q53R41 847 aaKnown RBP13.77□□□□□ -0.21
TPM3-211ENST00000368531 GPRC6AQ5T6X5 926 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 PDPK2PQ6A1A2 396 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 PSAPL1Q6NUJ1 521 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 AFTPHQ6ULP2 937 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 PRR23CQ6ZRP0 262 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 SNX20Q7Z614 316 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 LDB1Q86U70 411 aaPredicted RBP13.77□□□□□ -0.21
TPM3-211ENST00000368531 TMEM135Q86UB9 458 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 PARGQ86W56 976 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 SERPINA9Q86WD7 417 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 PHYKPLQ8IUZ5 450 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 UNC5BQ8IZJ1 945 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 FBXO36Q8NEA4 188 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 OR56A4Q8NGH8 313 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 OR4L1Q8NH43 312 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 NAT14Q8WUY8 206 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 OR1E3Q8WZA6 343 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 COX14Q96I36 57 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 VPS35Q96QK1 796 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 C19orf43Q9BQ61 176 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 WDR83Q9BRX9 315 aaKnown RBP13.77□□□□□ -0.21
TPM3-211ENST00000368531 OR2AG1Q9H205 316 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 TCEAL2Q9H3H9 227 aaPredicted RBP13.77□□□□□ -0.21
TPM3-211ENST00000368531 FGF22Q9HCT0 170 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 GPR27Q9NS67 375 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 ATXN10Q9UBB4 475 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 MTRF1LQ9UGC7 380 aaKnown RBP13.77□□□□□ -0.21
TPM3-211ENST00000368531 ZC3H7BQ9UGR2 993 aaKnown RBP13.77□□□□□ -0.21
TPM3-211ENST00000368531 KLF15Q9UIH9 416 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 PNMA8BQ9ULN7 279 aaPredicted RBP13.77□□□□□ -0.21
TPM3-211ENST00000368531 NFU1Q9UMS0 254 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 PRKAB1Q9Y478 270 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.77□□□□□ -0.21
TPM3-211ENST00000368531 TEX264Q9Y6I9 313 aa13.77□□□□□ -0.21
TPM3-211ENST00000368531 CACNA1HO95180 2353 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 PRSS38A1L453 326 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 E7ESA3 106 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 LRP3O75074 770 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 USP1O94782 785 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 RASGRP1O95267 797 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 TNFP01375 233 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 FUCA1P04066 466 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 CEACAM5P06731 702 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 POLBP06746 335 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 HOXC4P09017 264 aaPredicted RBP13.76□□□□□ -0.21
TPM3-211ENST00000368531 JUNDP17535 347 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 MSH3P20585 1137 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 TGM1P22735 817 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 PSMA3P25788 255 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 ARNTP27540 789 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 GNPDA1P46926 289 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 PPARDQ03181 441 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 IL27RAQ6UWB1 636 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 DET1Q7L5Y6 550 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 ADGRG6Q86SQ4 1221 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 PALM2Q8IXS6 379 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 PIANPQ8IYJ0 282 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 RBFAQ8N0V3 343 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 MINDY1Q8N5J2 469 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.76□□□□□ -0.21
TPM3-211ENST00000368531 DTX3LQ8TDB6 740 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 PYROXD1Q8WU10 500 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 PEX13Q92968 403 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.76□□□□□ -0.21
TPM3-211ENST00000368531 ULK4Q96C45 1275 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 LRRC39Q96DD0 335 aa13.76□□□□□ -0.21
TPM3-211ENST00000368531 CCDC97Q96F63 343 aaPredicted RBP13.76□□□□□ -0.21
TPM3-211ENST00000368531 PDXPQ96GD0 296 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms