RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 CTNNB1P35222 781 aa13.21□□□□□ -0.3
PTPRK-204ENST00000368210 PBX3P40426 434 aa13.21□□□□□ -0.3
PTPRK-204ENST00000368210 GNA12Q03113 381 aa13.21□□□□□ -0.3
PTPRK-204ENST00000368210 LDB1Q86U70 411 aaPredicted RBP13.21□□□□□ -0.3
PTPRK-204ENST00000368210 SLCO6A1Q86UG4 719 aa13.21□□□□□ -0.3
PTPRK-204ENST00000368210 LRRC17Q8N6Y2 441 aa13.21□□□□□ -0.3
PTPRK-204ENST00000368210 UPF1Q92900 1129 aaKnown RBP eCLIP13.21□□□□□ -0.3
PTPRK-204ENST00000368210 NTAN1Q96AB6 310 aa13.21□□□□□ -0.3
PTPRK-204ENST00000368210 ZHX1-C8orf76Q96EF9 292 aa13.21□□□□□ -0.3
PTPRK-204ENST00000368210 MYO19Q96H55 970 aa13.21□□□□□ -0.3
PTPRK-204ENST00000368210 ACSS2Q9NR19 701 aa13.21□□□□□ -0.3
PTPRK-204ENST00000368210 KIAA1522Q9P206 1035 aaPredicted RBP13.21□□□□□ -0.3
PTPRK-204ENST00000368210 PRKAG3Q9UGI9 489 aa13.21□□□□□ -0.3
PTPRK-204ENST00000368210 RAI2Q9Y5P3 530 aa13.21□□□□□ -0.3
PTPRK-204ENST00000368210 C5P01031 1676 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 CAPN8A6NHC0 703 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 QSOX1O00391 747 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 ACSL4O60488 711 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 NTRK1P04629 796 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 SLC7A2P52569 658 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 WDR4P57081 412 aaKnown RBP13.2□□□□□ -0.3
PTPRK-204ENST00000368210 FSTL1Q12841 308 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 GPR158Q5T848 1215 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 TTC23Q5W5X9 447 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 KBTBD8Q8NFY9 601 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 SCAMP5Q8TAC9 235 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 STYXQ8WUJ0 223 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 PDCD10Q9BUL8 212 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 KLHL28Q9NXS3 571 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 NR2E3Q9Y5X4 410 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 TM7SF2O76062 418 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 EOMESO95936 686 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 PABPC1P11940 636 aaKnown RBP13.2□□□□□ -0.3
PTPRK-204ENST00000368210 FOXN2P32314 431 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 ITGA1P56199 1179 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 AMIGO2Q86SJ2 522 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 RAB43Q86YS6 212 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 ADHFE1Q8IWW8 467 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 MAGEE2Q8TD90 523 aaPredicted RBP13.2□□□□□ -0.3
PTPRK-204ENST00000368210 DNAJB4Q9UDY4 337 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 VPS51Q9UID3 782 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 FAM220BPB1ANY3 271 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 NRP2O60462 931 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 SPATA31D3P0C874 917 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 KLHDC10Q6PID8 442 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 SPATA31D4Q6ZUB0 917 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 HMCESQ96FZ2 354 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 GATA5Q9BWX5 397 aaPredicted RBP13.2□□□□□ -0.3
PTPRK-204ENST00000368210 SP140LQ9H930 580 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 ZFYVE1Q9HBF4 777 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 TCRBV7S3A2A0A539 114 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 CCL22O00626 93 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 FAM20BO75063 409 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 CXCL14O95715 111 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 FTH1P02794 183 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 ADSLP30566 484 aaPredicted RBP13.2□□□□□ -0.3
PTPRK-204ENST00000368210 NDST2P52849 883 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 BNIP2Q12982 314 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 DPYSQ14117 519 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 SERPINA13PQ6UXR4 307 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 OR7D4Q8NG98 312 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 NPAS2Q99743 824 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 TRMT13Q9NUP7 481 aaKnown RBP13.2□□□□□ -0.3
PTPRK-204ENST00000368210 SIX4Q9UIU6 781 aa13.2□□□□□ -0.3
PTPRK-204ENST00000368210 PTPRJQ12913 1337 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 SLC28A1O00337 649 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 ZNF423Q2M1K9 1284 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 VWA5B1Q5TIE3 1220 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 ZYG11AQ6WRX3 759 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 GCNT7Q6ZNI0 430 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 SLC35F5Q8WV83 523 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 AZIN2Q96A70 460 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 SIPA1Q96FS4 1042 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 MAGEH1Q9H213 219 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 CFAP97Q9P2B7 532 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 ANKDD1BA6NHY2 528 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 TK2O00142 265 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 ZNF806P0C7X5 589 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 BCAP31P51572 246 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 COX10Q12887 443 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 TIGD2Q4W5G0 525 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 TSTD2Q5T7W7 516 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 ZNF57Q68EA5 555 aaPredicted RBP13.19□□□□□ -0.3
PTPRK-204ENST00000368210 RASSF6Q6ZTQ3 369 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 GLIS1Q8NBF1 620 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 ERLEC1Q96DZ1 483 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 FUBP3Q96I24 572 aaKnown RBP eCLIP13.19□□□□□ -0.31e-6■■□□□ 12.9
PTPRK-204ENST00000368210 OXCT2Q9BYC2 517 aaPredicted RBP13.19□□□□□ -0.3
PTPRK-204ENST00000368210 HDHD2Q9H0R4 259 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 EPB41L1Q9H4G0 881 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 RIBC2Q9H4K1 309 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 CXorf21Q9HAI6 301 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 ZNF510Q9Y2H8 683 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 A0A1B0GVM2 712 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 TCAF2A6NFQ2 919 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 TEX28O15482 410 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 GPR1P46091 355 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 MAPKAPK2P49137 400 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 SLC25A11Q02978 314 aaKnown RBP13.19□□□□□ -0.3
PTPRK-204ENST00000368210 DLG2Q15700 870 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms