RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 OR56A4Q8NGH8 313 aa14.2□□□□□ -0.14
CD48-201ENST00000368045 FUBP1Q96AE4 644 aaKnown RBP14.2□□□□□ -0.14
CD48-201ENST00000368045 CINPQ9BW66 212 aaPredicted RBP14.2□□□□□ -0.14
CD48-201ENST00000368045 IL1RL2Q9HB29 575 aa14.2□□□□□ -0.14
CD48-201ENST00000368045 CD320Q9NPF0 282 aa14.2□□□□□ -0.14
CD48-201ENST00000368045 RIC8BQ9NVN3 520 aa14.2□□□□□ -0.14
CD48-201ENST00000368045 ZIM2Q9NZV7 527 aa14.2□□□□□ -0.14
CD48-201ENST00000368045 UBA2Q9UBT2 640 aaPredicted RBP14.2□□□□□ -0.14
CD48-201ENST00000368045 MED16Q9Y2X0 877 aa14.2□□□□□ -0.14
CD48-201ENST00000368045 PRG3Q9Y2Y8 225 aaPredicted RBP14.2□□□□□ -0.14
CD48-201ENST00000368045 COMMD10Q9Y6G5 202 aa14.2□□□□□ -0.14
CD48-201ENST00000368045 TRMUO75648 421 aaKnown RBP14.19□□□□□ -0.14
CD48-201ENST00000368045 GJB3O75712 270 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 CKMT2P17540 419 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 FMO4P31512 558 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 SLC5A2P31639 672 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 NFYCQ13952 458 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 TSNQ15631 228 aaKnown RBP14.19□□□□□ -0.14
CD48-201ENST00000368045 EML3Q32P44 896 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 CST9Q5W186 159 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 GLT6D1Q7Z4J2 308 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 RTN4RL1Q86UN2 441 aaPredicted RBP14.19□□□□□ -0.14
CD48-201ENST00000368045 SPPL2CQ8IUH8 684 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 CHCHD4Q8N4Q1 142 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 CBR4Q8N4T8 237 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 PCSK9Q8NBP7 692 aaKnown RBP14.19□□□□□ -0.14
CD48-201ENST00000368045 C2orf15Q8WU43 125 aaKnown RBP14.19□□□□□ -0.14
CD48-201ENST00000368045 GFM2Q969S9 779 aaKnown RBP14.19□□□□□ -0.14
CD48-201ENST00000368045 LRCH3Q96II8 777 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 KCNA7Q96RP8 456 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 GIMAP2Q9UG22 337 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 PCTPQ9UKL6 214 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 BTRCQ9Y297 605 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 A0A1B0GVG6 124 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 SAC3D1A6NKF1 404 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 H3BSA7 217 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 ZNF701M0R085 212 aaPredicted RBP14.19□□□□□ -0.14
CD48-201ENST00000368045 GIPC1O14908 333 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 INSIG1O15503 277 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 KDELR3O43731 214 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 ACSL4O60488 711 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 TLR5O60602 858 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 SNX2O60749 519 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 SLC22A3O75751 556 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 RASAL1O95294 804 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 MYCNP04198 464 aaPredicted RBP14.19□□□□□ -0.14
CD48-201ENST00000368045 PIRTP0C851 137 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 SPATA31D3P0C874 917 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 TTPAP49638 278 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 GSK3BP49841 420 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 CCT8P50990 548 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 CLCN4P51793 760 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 CDH4P55283 916 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 FCGRTP55899 365 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 ERVK-8P63133 956 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 GPR17Q13304 367 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 CAPRIN1Q14444 709 aaKnown RBP14.19□□□□□ -0.14
CD48-201ENST00000368045 AARS2Q5JTZ9 985 aaKnown RBP14.19□□□□□ -0.14
CD48-201ENST00000368045 SPATA31D4Q6ZUB0 917 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 EPHX4Q8IUS5 362 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 TBC1D21Q8IYX1 336 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 TTC9BQ8N6N2 239 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 FAM47BQ8NA70 645 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 OR4K2Q8NGD2 314 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 ADAMTS16Q8TE57 1224 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 MYEOVQ96EZ4 313 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 GPR21Q99679 349 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 SEMA4BQ9NPR2 832 aaPredicted RBP14.19□□□□□ -0.14
CD48-201ENST00000368045 GMPR2Q9P2T1 348 aaKnown RBP14.19□□□□□ -0.14
CD48-201ENST00000368045 AURKCQ9UQB9 309 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 SPO11Q9Y5K1 396 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 UTRNP46939 3433 aa14.19□□□□□ -0.14
CD48-201ENST00000368045 FAM234BA2RU67 622 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 MTMR11A4FU01 709 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 TRIM64A6NGJ6 449 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 CCDC154A6NI56 674 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 CDC7O00311 574 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 BTN3A1O00481 513 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 DLGAP1O14490 977 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 PKMP14618 531 aaKnown RBP14.18□□□□□ -0.14
CD48-201ENST00000368045 CR2P20023 1033 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 LPOP22079 712 aaPredicted RBP14.18□□□□□ -0.14
CD48-201ENST00000368045 CTGFP29279 349 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 SLC11A2P49281 568 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 OXCT1P55809 520 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 PLOD1Q02809 727 aaPredicted RBP14.18□□□□□ -0.14
CD48-201ENST00000368045 MERTKQ12866 999 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 BIRC2Q13490 618 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 FXNQ16595 210 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 PTPRNQ16849 979 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 LRRC23Q53EV4 343 aaPredicted RBP14.18□□□□□ -0.14
CD48-201ENST00000368045 GPRIN3Q6ZVF9 776 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 SYVN1Q86TM6 617 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 PROSER1Q86XN7 944 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 TMEM199Q8N511 208 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 GPR152Q8TDT2 470 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 SEPT8Q92599 483 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 RMDN1Q96DB5 314 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 CEP295NLQ96MC4 621 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 BIRC8Q96P09 236 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms