RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 CSF2RBP32927 897 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 CLCNKAP51800 687 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 LLGL1Q15334 1064 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 PCSK7Q16549 785 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 AMZ1Q400G9 498 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 ARHGAP40Q5TG30 622 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 PDPK2PQ6A1A2 396 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 IYDQ6PHW0 289 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 ADGRG6Q86SQ4 1221 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 TRAM1L1Q8N609 369 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 OR4D9Q8NGE8 314 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 SLC37A2Q8TED4 501 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 SLC39A7Q92504 469 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 KRT35Q92764 455 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 WBP1Q96G27 269 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 MRFAP1L1Q96HT8 127 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 FCRL5Q96RD9 977 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 CMKLR1Q99788 373 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 ZSCAN5AQ9BUG6 496 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 TRIM39Q9HCM9 518 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 RAD18Q9NS91 495 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 PISDQ9UG56 409 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 TMPRSS11EQ9UL52 423 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 PRAMEF33A0A0G2JMD5 474 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 GPR89AB7ZAQ6 455 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ERVH48-1M5A8F1 160 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ZW10O43264 779 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 MTSS1O43312 755 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 PRAMEF10O60809 474 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 PMPCBO75439 489 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 JMJD7P0C870 316 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 GPR89BP0CG08 455 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 THRAP10827 490 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 BPIP17213 487 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 NFKB1P19838 968 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ARSDP51689 593 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ZNF75DP51815 510 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 GPLD1P80108 840 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 RHDQ02161 417 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 TRA2AQ13595 282 aaKnown RBP eCLIP13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 PPP2R5EQ16537 467 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 MAP9Q49MG5 647 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ODF2Q5BJF6 829 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ZNF648Q5T619 568 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 NKAIN2Q5VXU1 208 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 KAZNQ674X7 775 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 BBS12Q6ZW61 710 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 DTX1Q86Y01 620 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ZNF567Q8N184 647 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 DTX3LQ8TDB6 740 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 TTC9Q92623 222 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 P3H4Q92791 437 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 GLYATL1Q969I3 302 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 OXNAD1Q96HP4 312 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 MRGPRX2Q96LB1 330 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 QKIQ96PU8 341 aaKnown RBP eCLIP13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 PLEKHG4BQ96PX9 1271 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 SRPK1Q96SB4 655 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 VAT1Q99536 393 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 DPYSL5Q9BPU6 564 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 HERPUD2Q9BSE4 406 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 SPATA16Q9BXB7 569 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 RBSNQ9H1K0 784 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 SARS2Q9NP81 518 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 UBP1Q9NZI7 540 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 FAM153AQ9UHL3 310 aa13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 REXO2Q9Y3B8 237 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 EPN1Q9Y6I3 576 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF1A-202ENST00000366159 AHCTF1Q8WYP5 2266 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 TRBV23OR9-2A0A075B6M9 112 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 BTNL10A8MVZ5 291 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 HACD1B0YJ81 288 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 GRID2O43424 1007 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 SLC25A14O95258 325 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 NDUFA10O95299 355 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 PRB1P04280 392 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 FGF3P11487 239 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 CCL4P13236 92 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 CTNNA1P35221 906 aaKnown RBP13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 HMGCLP35914 325 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 WNT3AP56704 352 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 COPS2P61201 443 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 XRCC4Q13426 336 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 TGIF1Q15583 401 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ZNF569Q5MCW4 686 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 PHF19Q5T6S3 580 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 TMEM71Q6P5X7 295 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ZC3H18Q86VM9 953 aaKnown RBP13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 TTC30BQ8N4P2 665 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 RCBTB1Q8NDN9 531 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 HTR3CQ8WXA8 447 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 USP7Q93009 1102 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 RBM41Q96IZ5 413 aaKnown RBP13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 CALR3Q96L12 384 aaKnown RBP13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 CCDC74BQ96LY2 380 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 VPS35Q96QK1 796 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 CCNL2Q96S94 520 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 GORASP1Q9BQQ3 440 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ANP32EQ9BTT0 268 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms