RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 ZCCHC11Q5TAX3 1644 aaKnown RBP13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 RIIAD1A6NNX1 92 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 ECHS1P30084 290 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 RPL38P63173 70 aaKnown RBP13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 VMACQ2NL98 169 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 APTXQ7Z2E3 356 aaKnown RBP13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 ATG9AQ7Z3C6 839 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 PNPT1Q8TCS8 783 aaKnown RBP13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 IFT46Q9NQC8 304 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 KBTBD4Q9NVX7 518 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 RLN2P04090 185 aa13.15□□□□□ -0.31
SRGAP3-201ENST00000360413 ABCG1P45844 678 aa13.15□□□□□ -0.31
SRGAP3-201ENST00000360413 RORCP51449 518 aa13.15□□□□□ -0.31
SRGAP3-201ENST00000360413 MPPE1Q53F39 396 aa13.15□□□□□ -0.31
SRGAP3-201ENST00000360413 ZNF517Q6ZMY9 492 aaPredicted RBP13.15□□□□□ -0.31
SRGAP3-201ENST00000360413 GALNT12Q8IXK2 581 aa13.15□□□□□ -0.31
SRGAP3-201ENST00000360413 PNLDC1Q8NA58 520 aaKnown RBP13.15□□□□□ -0.31
SRGAP3-201ENST00000360413 RIOK2Q9BVS4 552 aaKnown RBP13.15□□□□□ -0.31
SRGAP3-201ENST00000360413 ATXN3LQ9H3M9 355 aa13.15□□□□□ -0.31
SRGAP3-201ENST00000360413 MRPL17Q9NRX2 175 aaKnown RBP13.15□□□□□ -0.31
SRGAP3-201ENST00000360413 KCNIP3Q9Y2W7 256 aa13.15□□□□□ -0.31
SRGAP3-201ENST00000360413 C2orf71A6NGG8 1288 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 MANSC4A6NHS7 340 aaPredicted RBP13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 BBIP1A8MTZ0 92 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 C9IYK1 514 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 CLDN4O14493 209 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 RPLP0P05388 317 aaKnown RBP13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 GJA9P57773 515 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 IRF8Q02556 426 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 HLFQ16534 295 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 AADACL2Q6P093 401 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 ANKFN1Q8N957 763 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 TMLHEQ9NVH6 421 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 RFXANKO14593 260 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 FFAR3O14843 346 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 GPR42O15529 346 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 CRADDP78560 199 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 PCDH19Q8TAB3 1148 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 IPCEF1Q8WWN9 437 aaPredicted RBP13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 DNAJC28Q9NX36 388 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 APOC4-APOC2K7ER74 178 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 KAT7O95251 611 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 APOC2P02655 101 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 TSPAN8P19075 237 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 ALG10Q5BKT4 473 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 KATNAL2Q8IYT4 538 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 DENND2DQ9H6A0 471 aaPredicted RBP13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 METTL8Q9H825 291 aaKnown RBP13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 TAS2R7Q9NYW3 318 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 RBM47A0AV96 593 aaKnown RBP13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 CAPN14A8MX76 684 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 SLC22A3O75751 556 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 H6PDO95479 791 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 RPS2P15880 293 aaKnown RBP13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 ZNF14P17017 642 aaPredicted RBP13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 GABRB2P47870 512 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 IKBKEQ14164 716 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 KCNT2Q6UVM3 1135 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 PM20D2Q8IYS1 436 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 AVL9Q8NBF6 648 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 GATAD2BQ8WXI9 593 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 HSPBAP1Q96EW2 488 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 SYT15Q9BQS2 421 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 PDE10AQ9Y233 779 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 USP20Q9Y2K6 914 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 CLCN5P51795 746 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 CSTF1Q05048 431 aaKnown RBP13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 GXYLT1Q4G148 440 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 AADACL4Q5VUY2 407 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 TAPT1Q6NXT6 567 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 CYP4V2Q6ZWL3 525 aaPredicted RBP13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 RNF31Q96EP0 1072 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 EDF1O60869 148 aaKnown RBP13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 CCNYL2Q5T2Q4 361 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 OR2L3Q8NG85 312 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 PPP1R13LQ8WUF5 828 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 ZNF639Q9UID6 485 aa13.14□□□□□ -0.31
SRGAP3-201ENST00000360413 ZNF3P17036 446 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 VARSP26640 1264 aaKnown RBP13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 RPS9P46781 194 aaKnown RBP13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 OAZ1P54368 228 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 CBR4Q8N4T8 237 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 TAS1R2Q8TE23 839 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 RAD51AP1Q96B01 352 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 CCDC86Q9H6F5 360 aaKnown RBP13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 POPDC2Q9HBU9 364 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 FRMPD1Q5SYB0 1578 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 PPEF2O14830 753 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 LHCGRP22888 699 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 PRR5P85299 388 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 WSCD2Q2TBF2 565 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 SH3D19Q5HYK7 790 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 CERS2Q96G23 380 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 NSMCE3Q96MG7 304 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 ADARB2Q9NS39 739 aaKnown RBP13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 TMEM39AQ9NV64 488 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 TMX2Q9Y320 296 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 PCDHGB7Q9Y5F8 929 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 MED14O60244 1454 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms