RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 TRIM16LQ309B1 348 aa10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 ZNF514Q96K75 400 aaPredicted RBP10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 IL12RB2Q99665 862 aa10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 INTS10Q9NVR2 710 aaKnown RBP10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 CLDND1Q9NY35 253 aa10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 IL36AQ9UHA7 158 aa10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 PCDHGC4Q9Y5F7 938 aa10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 GRIN2DO15399 1336 aa10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 MYH11P35749 1972 aa10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 ADH5P11766 374 aa10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 CHRNB2P17787 502 aa10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 RPL4P36578 427 aaKnown RBP10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 CCNFP41002 786 aa10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 PTSQ03393 145 aa10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 COL9A3Q14050 684 aaPredicted RBP10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 CARD16Q5EG05 197 aa10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 OFCC1Q8IZS5 231 aa10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 MPP5Q8N3R9 675 aa10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 RACGAP1Q9H0H5 632 aa10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 ELOVL2Q9NXB9 296 aa10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 CD84Q9UIB8 345 aa10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 ADGRF1Q5T601 910 aa10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 SULT1C3Q6IMI6 304 aa10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 CPT1BQ92523 772 aa10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 TBATAQ96M53 351 aa10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 TEFMQ96QE5 360 aaKnown RBP10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 SH3GL3Q99963 347 aa10.28□□□□□ -0.76
SPTAN1-201ENST00000358161 GOT2P00505 430 aaKnown RBP10.27□□□□□ -0.76
SPTAN1-201ENST00000358161 ESR1P03372 595 aa10.27□□□□□ -0.76
SPTAN1-201ENST00000358161 OGNP20774 298 aaKnown RBP10.27□□□□□ -0.76
SPTAN1-201ENST00000358161 MED27Q6P2C8 311 aa10.27□□□□□ -0.76
SPTAN1-201ENST00000358161 ARMC8Q8IUR7 673 aa10.27□□□□□ -0.76
SPTAN1-201ENST00000358161 AHI1Q8N157 1196 aa10.27□□□□□ -0.76
SPTAN1-201ENST00000358161 LCN9Q8WX39 176 aa10.27□□□□□ -0.76
SPTAN1-201ENST00000358161 SLC38A3Q99624 504 aa10.27□□□□□ -0.76
SPTAN1-201ENST00000358161 RAB11FIP5Q9BXF6 653 aa10.27□□□□□ -0.76
SPTAN1-201ENST00000358161 WRAP73Q9P2S5 460 aaPredicted RBP10.27□□□□□ -0.76
SPTAN1-201ENST00000358161 PPIEQ9UNP9 301 aaKnown RBP10.27□□□□□ -0.76
SPTAN1-201ENST00000358161 SASH3O75995 380 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 FSBPO95073 299 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 EPHA3P29320 983 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 TMC5Q6UXY8 1006 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 SCAMP5Q8TAC9 235 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 PWWP2AQ96N64 755 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 SAMD11Q96NU1 681 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 BTBD9Q96Q07 612 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 LPIN3Q9BQK8 851 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 ABCG8Q9H221 673 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 C3orf18Q9UK00 162 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 SCML2Q9UQR0 700 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 R3HDM2Q9Y2K5 976 aaKnown RBP10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 NAV1Q8NEY1 1877 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 ZNF536O15090 1300 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 EFCAB10A6NFE3 127 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 OR2AG2A6NM03 316 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 IGFALSP35858 605 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 CSKP41240 450 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 CSNK2BP67870 215 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 DLG2Q15700 870 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 HOPXQ9BPY8 73 aaPredicted RBP10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 IGSF9Q9P2J2 1179 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 TRPS1Q9UHF7 1281 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 LRCH1Q9Y2L9 728 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 GSTK1Q9Y2Q3 226 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 SLC35G6P0C7Q6 338 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 UNGP13051 313 aaPredicted RBP10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 CDH3P22223 829 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 TAS2R41P59536 307 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 LGALS3BPQ08380 585 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 COX10Q12887 443 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 NAE1Q13564 534 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 C9orf64Q5T6V5 341 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 GALNT18Q6P9A2 607 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 DRICH1Q6PGQ1 229 aaPredicted RBP10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 CRYBG2Q8N1P7 616 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 GDAP2Q9NXN4 497 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 PRPF19Q9UMS4 504 aaKnown RBP10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 SUV39H1O43463 412 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 LIMK2P53671 638 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 SEMA5AQ13591 1074 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 TTC23Q5W5X9 447 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 C11orf88Q6PI97 169 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 DLK2Q6UY11 383 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 ZYG11AQ6WRX3 759 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 OR8H2Q8N162 312 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 SPATA22Q8NHS9 363 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 ZMAT2Q96NC0 199 aaKnown RBP10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 TRMT61BQ9BVS5 477 aaKnown RBP10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 SEMA6AQ9H2E6 1030 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 DPEP2Q9H4A9 486 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 STXBP1P61764 594 aaKnown RBP10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 INAVAQ3KP66 663 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 TSTD1Q8NFU3 115 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 HDHD2Q9H0R4 259 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 OSBPL2Q9H1P3 480 aa10.27□□□□□ -0.77
SPTAN1-201ENST00000358161 UBR2Q8IWV8 1755 aa10.26□□□□□ -0.77
SPTAN1-201ENST00000358161 DHX15O43143 795 aaKnown RBP10.26□□□□□ -0.77
SPTAN1-201ENST00000358161 CD48P09326 243 aa10.26□□□□□ -0.77
SPTAN1-201ENST00000358161 SPIBQ01892 262 aa10.26□□□□□ -0.77
SPTAN1-201ENST00000358161 TMEM220Q6QAJ8 160 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms