RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 PQLC3Q8N755 202 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 AVL9Q8NBF6 648 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 NCSTNQ92542 709 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 RAPGEF5Q92565 580 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 EXTL1Q92935 676 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 ART4Q93070 314 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 FAF2Q96CS3 445 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 AGAP3Q96P47 875 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 SRPK1Q96SB4 655 aaKnown RBP10.56□□□□□ -0.72
CAPN3-204ENST00000356316 DDA1Q9BW61 102 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 SPATA16Q9BXB7 569 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 PACSIN1Q9BY11 444 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 GPR63Q9BZJ6 419 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 CARD9Q9H257 536 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 PCDHGA3Q9Y5H0 932 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 SSU72P8A0A1W2PR75 194 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 EFCAB7A8K855 629 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 ZNF487B1APH4 448 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 B4E171 279 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.55□□□□□ -0.72
CAPN3-204ENST00000356316 DNAJC6O75061 913 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 THRAP10827 490 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 ACP5P13686 325 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 TNNT1P13805 278 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 TSPAN7P41732 249 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 MAPK9P45984 424 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 IFI35P80217 286 aaPredicted RBP10.55□□□□□ -0.72
CAPN3-204ENST00000356316 NFATC3Q12968 1075 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 SRSF6Q13247 344 aaKnown RBP10.55□□□□□ -0.72
CAPN3-204ENST00000356316 GALNT3Q14435 633 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 IHHQ14623 411 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 PCSK7Q16549 785 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 HENMT1Q5T8I9 393 aaKnown RBP10.55□□□□□ -0.72
CAPN3-204ENST00000356316 PRICKLE2Q7Z3G6 844 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 ZNF761Q86XN6 746 aaPredicted RBP10.55□□□□□ -0.72
CAPN3-204ENST00000356316 CPNE8Q86YQ8 564 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 RFX6Q8HWS3 928 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 RHOT2Q8IXI1 618 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 NKD1Q969G9 470 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 TEFMQ96QE5 360 aaKnown RBP10.55□□□□□ -0.72
CAPN3-204ENST00000356316 HERPUD2Q9BSE4 406 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 ZSCAN5AQ9BUG6 496 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 BRD8Q9H0E9 1235 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 MAGEE1Q9HCI5 957 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 TRIM39Q9HCM9 518 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 SARS2Q9NP81 518 aaKnown RBP10.55□□□□□ -0.72
CAPN3-204ENST00000356316 DDX56Q9NY93 547 aaKnown RBP10.55□□□□□ -0.72
CAPN3-204ENST00000356316 TBC1D29Q9UFV1 150 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 CNOT6Q9ULM6 557 aaKnown RBP10.55□□□□□ -0.72
CAPN3-204ENST00000356316 KCNK6Q9Y257 313 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 OAS3Q9Y6K5 1087 aaKnown RBP10.55□□□□□ -0.72
CAPN3-204ENST00000356316 TENM4Q6N022 2769 aa10.55□□□□□ -0.72
CAPN3-204ENST00000356316 PIEZO2Q9H5I5 2752 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 KIR2DS5A0A0G2JLQ3 304 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 A0A0G2JNG1 304 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 FADS2P1A8MWK0 482 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 GPR89AB7ZAQ6 455 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 KIR2DS3K7RE56 304 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 CAPN5O15484 640 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-204ENST00000356316 NUAK1O60285 661 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 MTA2O94776 668 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 EML2O95834 649 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 SLC4A1P02730 911 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 MMP2P08253 660 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 GPR89BP0CG08 455 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 F3P13726 295 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 UGT1A3P35503 534 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 EPHA4P54764 986 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 CYP4F2P78329 520 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 KCNC4Q03721 635 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 CDK18Q07002 472 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 KIR2DS5Q14953 304 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 TBR1Q16650 682 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 SKOR2Q2VWA4 1001 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-204ENST00000356316 LINC00303Q3SY05 128 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 ZNF569Q5MCW4 686 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-204ENST00000356316 ALS2CLQ60I27 953 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 CEACAM20Q6UY09 585 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 VSIG1Q86XK7 387 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 PLXDC1Q8IUK5 500 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 TRIM48Q8IWZ4 208 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 RHOT1Q8IXI2 618 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 CACNA2D3Q8IZS8 1091 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 PLD5Q8N7P1 536 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 CNTD1Q8N815 330 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 EXD3Q8N9H8 876 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 KIAA1143Q96AT1 154 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-204ENST00000356316 IMP4Q96G21 291 aaKnown RBP10.54□□□□□ -0.72
CAPN3-204ENST00000356316 DNAJC7Q99615 494 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 ZPBPQ9BS86 351 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 CEP41Q9BYV8 373 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 SLC25A51Q9H1U9 297 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 OR2AG1Q9H205 316 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 OSGEPL1Q9H4B0 414 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 EPB41L1Q9H4G0 881 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 NHEJ1Q9H9Q4 299 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-204ENST00000356316 OCIAD1Q9NX40 245 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 TMEM9Q9P0T7 183 aa10.54□□□□□ -0.72
CAPN3-204ENST00000356316 PDP2Q9P2J9 529 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms