RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 HGFP14210 728 aa22.1■■□□□ 1.13
NKX2-1-201ENST00000354822 PEX19P40855 299 aa22.1■■□□□ 1.13
NKX2-1-201ENST00000354822 MRPL19P49406 292 aaKnown RBP22.1■■□□□ 1.13
NKX2-1-201ENST00000354822 LIN52Q52LA3 116 aa22.1■■□□□ 1.13
NKX2-1-201ENST00000354822 ZRANB3Q5FWF4 1079 aa22.1■■□□□ 1.13
NKX2-1-201ENST00000354822 PSAPL1Q6NUJ1 521 aa22.1■■□□□ 1.13
NKX2-1-201ENST00000354822 PIANPQ8IYJ0 282 aa22.1■■□□□ 1.13
NKX2-1-201ENST00000354822 ZNF483Q8TF39 744 aaPredicted RBP22.1■■□□□ 1.13
NKX2-1-201ENST00000354822 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.1■■□□□ 1.13
NKX2-1-201ENST00000354822 CLSTN3Q9BQT9 956 aa22.1■■□□□ 1.13
NKX2-1-201ENST00000354822 ZBED2Q9BTP6 218 aa22.1■■□□□ 1.13
NKX2-1-201ENST00000354822 SEMA4BQ9NPR2 832 aaPredicted RBP22.1■■□□□ 1.13
NKX2-1-201ENST00000354822 POLG2Q9UHN1 485 aa22.1■■□□□ 1.13
NKX2-1-201ENST00000354822 GOLGA8CPA6NN73 597 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 GIPC1O14908 333 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 ESRRBO95718 433 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 CXCL10P02778 98 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 UROSP10746 265 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 CDKN1CP49918 316 aaPredicted RBP22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 CCNHP51946 323 aaPredicted RBP22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 SLC7A2P52569 658 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 TRAF2Q12933 501 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 RALGDSQ12967 914 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 GRB7Q14451 532 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 DHFR2Q86XF0 187 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 TTC30BQ8N4P2 665 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 ZUFSPQ96AP4 578 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 IGSF21Q96ID5 467 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 PAK6Q9NQU5 681 aaPredicted RBP22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 AP4B1Q9Y6B7 739 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 C15orf38-AP3S2A0A0A6YYH1 394 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 NR5A2O00482 541 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 CD160O95971 181 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 LINC00032P0C843 101 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 IRF1P10914 325 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 VEPH1Q14D04 833 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 ARPINQ7Z6K5 226 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 GPSM1Q86YR5 675 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 EFHBQ8N7U6 833 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 OR56A4Q8NGH8 313 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 DEFB118Q96PH6 123 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 KCNA7Q96RP8 456 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 MAP10Q9P2G4 905 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 ABCD2Q9UBJ2 740 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 IKZF3Q9UKT9 509 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 PKP3Q9Y446 797 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 HTTP42858 3142 aa22.09■■□□□ 1.13
NKX2-1-201ENST00000354822 GBF1Q92538 1859 aa22.08■■□□□ 1.13
NKX2-1-201ENST00000354822 NPEPPSL1A6NEC2 478 aa22.08■■□□□ 1.13
NKX2-1-201ENST00000354822 H0Y626 953 aa22.08■■□□□ 1.13
NKX2-1-201ENST00000354822 SNX2O60749 519 aa22.08■■□□□ 1.13
NKX2-1-201ENST00000354822 PARNO95453 639 aaKnown RBP22.08■■□□□ 1.13
NKX2-1-201ENST00000354822 TSPAN12O95859 305 aa22.08■■□□□ 1.13
NKX2-1-201ENST00000354822 CHRM3P20309 590 aa22.08■■□□□ 1.13
NKX2-1-201ENST00000354822 FOXM1Q08050 763 aa22.08■■□□□ 1.13
NKX2-1-201ENST00000354822 CTSL3PQ5NE16 218 aa22.08■■□□□ 1.13
NKX2-1-201ENST00000354822 SNX31Q8N9S9 440 aa22.08■■□□□ 1.13
NKX2-1-201ENST00000354822 EME1Q96AY2 570 aa22.08■■□□□ 1.13
NKX2-1-201ENST00000354822 UHRF1Q96T88 793 aaPredicted RBP22.08■■□□□ 1.13
NKX2-1-201ENST00000354822 HGH1Q9BTY7 390 aa22.08■■□□□ 1.13
NKX2-1-201ENST00000354822 TRIM15Q9C019 465 aa22.08■■□□□ 1.13
NKX2-1-201ENST00000354822 SAGE1Q9NXZ1 904 aa22.08■■□□□ 1.13
NKX2-1-201ENST00000354822 NDUFA13Q9P0J0 144 aa22.08■■□□□ 1.13
NKX2-1-201ENST00000354822 E5RI56 91 aa22.08■■□□□ 1.12
NKX2-1-201ENST00000354822 PRR35P0CG20 571 aa22.08■■□□□ 1.12
NKX2-1-201ENST00000354822 CCL23P55773 120 aa22.08■■□□□ 1.12
NKX2-1-201ENST00000354822 C6orf10Q5SRN2 563 aa22.08■■□□□ 1.12
NKX2-1-201ENST00000354822 RETREG3Q86VR2 466 aa22.08■■□□□ 1.12
NKX2-1-201ENST00000354822 SIDT2Q8NBJ9 832 aaKnown RBP22.08■■□□□ 1.12
NKX2-1-201ENST00000354822 CD200R1Q8TD46 325 aa22.08■■□□□ 1.12
NKX2-1-201ENST00000354822 HIPK3Q9H422 1215 aa22.08■■□□□ 1.12
NKX2-1-201ENST00000354822 TMEM45AQ9NWC5 275 aa22.08■■□□□ 1.12
NKX2-1-201ENST00000354822 GALPQ9UBC7 116 aa22.08■■□□□ 1.12
NKX2-1-201ENST00000354822 PCTPQ9UKL6 214 aa22.08■■□□□ 1.12
NKX2-1-201ENST00000354822 OGDHLQ9ULD0 1010 aa22.08■■□□□ 1.12
NKX2-1-201ENST00000354822 PTGDR2Q9Y5Y4 395 aa22.08■■□□□ 1.12
NKX2-1-201ENST00000354822 TYW5A2RUC4 315 aaKnown RBP22.07■■□□□ 1.12
NKX2-1-201ENST00000354822 MAP3K13O43283 966 aa22.07■■□□□ 1.12
NKX2-1-201ENST00000354822 OR1I1O60431 355 aa22.07■■□□□ 1.12
NKX2-1-201ENST00000354822 NIPSNAP2O75323 286 aa22.07■■□□□ 1.12
NKX2-1-201ENST00000354822 CACNG1Q06432 222 aa22.07■■□□□ 1.12
NKX2-1-201ENST00000354822 VPS26BQ4G0F5 336 aa22.07■■□□□ 1.12
NKX2-1-201ENST00000354822 BLOC1S3Q6QNY0 202 aa22.07■■□□□ 1.12
NKX2-1-201ENST00000354822 EEF1AKMT1Q8WVE0 214 aa22.07■■□□□ 1.12
NKX2-1-201ENST00000354822 LINGO1Q96FE5 620 aa22.07■■□□□ 1.12
NKX2-1-201ENST00000354822 PDLIM5Q96HC4 596 aaKnown RBP22.07■■□□□ 1.12
NKX2-1-201ENST00000354822 FEM1AQ9BSK4 669 aa22.07■■□□□ 1.12
NKX2-1-201ENST00000354822 MAGEE1Q9HCI5 957 aa22.07■■□□□ 1.12
NKX2-1-201ENST00000354822 BPIFA1Q9NP55 256 aa22.07■■□□□ 1.12
NKX2-1-201ENST00000354822 LHX3Q9UBR4 397 aa22.07■■□□□ 1.12
NKX2-1-201ENST00000354822 GPR45Q9Y5Y3 372 aa22.07■■□□□ 1.12
NKX2-1-201ENST00000354822 C2orf78A6NCI8 922 aa22.06■■□□□ 1.12
NKX2-1-201ENST00000354822 MYCP01106 439 aaPredicted RBP22.06■■□□□ 1.12
NKX2-1-201ENST00000354822 PABPC4LP0CB38 370 aaKnown RBP22.06■■□□□ 1.12
NKX2-1-201ENST00000354822 ZNF26P17031 533 aaPredicted RBP22.06■■□□□ 1.12
NKX2-1-201ENST00000354822 PLD1Q13393 1074 aa22.06■■□□□ 1.12
NKX2-1-201ENST00000354822 LINGO4Q6UY18 593 aa22.06■■□□□ 1.12
NKX2-1-201ENST00000354822 CERS6Q6ZMG9 384 aa22.06■■□□□ 1.12
NKX2-1-201ENST00000354822 TAS2R42Q7RTR8 314 aa22.06■■□□□ 1.12
NKX2-1-201ENST00000354822 GOLM1Q8NBJ4 401 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms