RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 IFT81Q8WYA0 676 aa21.97■■□□□ 1.11
SHMT1-203ENST00000354098 EBNA1BP2Q99848 306 aaKnown RBP21.97■■□□□ 1.11
SHMT1-203ENST00000354098 FAM114A2Q9NRY5 505 aa21.97■■□□□ 1.11
SHMT1-203ENST00000354098 SLC30A1Q9Y6M5 507 aa21.97■■□□□ 1.11
SHMT1-203ENST00000354098 RPS6KL1Q9Y6S9 549 aa21.97■■□□□ 1.11
SHMT1-203ENST00000354098 AGAP14A8MT82 685 aa21.96■■□□□ 1.11
SHMT1-203ENST00000354098 CEACAM5P06731 702 aa21.96■■□□□ 1.11
SHMT1-203ENST00000354098 ARNTP27540 789 aa21.96■■□□□ 1.11
SHMT1-203ENST00000354098 PRAMEP78395 509 aa21.96■■□□□ 1.11
SHMT1-203ENST00000354098 FASTKD3Q14CZ7 662 aaKnown RBP21.96■■□□□ 1.11
SHMT1-203ENST00000354098 ANKRD20A4Q4UJ75 823 aa21.96■■□□□ 1.11
SHMT1-203ENST00000354098 PSAPL1Q6NUJ1 521 aa21.96■■□□□ 1.11
SHMT1-203ENST00000354098 SNX20Q7Z614 316 aa21.96■■□□□ 1.11
SHMT1-203ENST00000354098 PARGQ86W56 976 aa21.96■■□□□ 1.11
SHMT1-203ENST00000354098 ANKMY2Q8IV38 441 aa21.96■■□□□ 1.11
SHMT1-203ENST00000354098 PIANPQ8IYJ0 282 aa21.96■■□□□ 1.11
SHMT1-203ENST00000354098 OR1E3Q8WZA6 343 aa21.96■■□□□ 1.11
SHMT1-203ENST00000354098 ZNF669Q96BR6 464 aaPredicted RBP21.96■■□□□ 1.11
SHMT1-203ENST00000354098 PDXPQ96GD0 296 aa21.96■■□□□ 1.11
SHMT1-203ENST00000354098 ELF4Q99607 663 aaPredicted RBP21.96■■□□□ 1.11
SHMT1-203ENST00000354098 ZDHHC5Q9C0B5 715 aa21.96■■□□□ 1.11
SHMT1-203ENST00000354098 ERVMER34-1Q9H9K5 563 aa21.96■■□□□ 1.11
SHMT1-203ENST00000354098 DNAJC28Q9NX36 388 aa21.96■■□□□ 1.11
SHMT1-203ENST00000354098 IL1RAPL1Q9NZN1 696 aa21.96■■□□□ 1.11
SHMT1-203ENST00000354098 CHMP2BQ9UQN3 213 aa21.96■■□□□ 1.11
SHMT1-203ENST00000354098 TEX264Q9Y6I9 313 aa21.96■■□□□ 1.11
SHMT1-203ENST00000354098 ZCWPW2A0A1B0GU75 182 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 E7ESA3 106 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 SCAMP1O15126 338 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 VAPBO95292 243 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 ASMTLO95671 621 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 ITGALP20701 1170 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 SHBQ15464 509 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 ZNF423Q2M1K9 1284 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 ALG11Q2TAA5 492 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 ARMC3Q5W041 872 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 IL27RAQ6UWB1 636 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 RD3Q7Z3Z2 195 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 PHYKPLQ8IUZ5 450 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 GDAP1Q8TB36 358 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 TCEAL2Q9H3H9 227 aaPredicted RBP21.95■■□□□ 1.1
SHMT1-203ENST00000354098 SMOXQ9NWM0 555 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 KLQ9UEF7 1012 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 MOSPD1Q9UJG1 213 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 SLC17A4Q9Y2C5 497 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 TMEM131Q92545 1883 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 GOLGA8KD6RF30 607 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 GOLGA8TH3BQL2 631 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 GDF9O60383 454 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 SLU7O95391 586 aaKnown RBP21.95■■□□□ 1.1
SHMT1-203ENST00000354098 KELP23276 732 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 FOXN2P32314 431 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 CARSP49589 748 aaKnown RBP21.95■■□□□ 1.1
SHMT1-203ENST00000354098 SRP54P61011 504 aaKnown RBP21.95■■□□□ 1.1
SHMT1-203ENST00000354098 IL9RQ01113 521 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 CACNG1Q06432 222 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 GPRC6AQ5T6X5 926 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 MARK2Q7KZI7 788 aaKnown RBP21.95■■□□□ 1.1
SHMT1-203ENST00000354098 TAS2R42Q7RTR8 314 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 MINDY1Q8N5J2 469 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 OR4L1Q8NH43 312 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 CCDC97Q96F63 343 aaPredicted RBP21.95■■□□□ 1.1
SHMT1-203ENST00000354098 PLAC1Q9HBJ0 212 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 TRIM39Q9HCM9 518 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 ATXN10Q9UBB4 475 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 CRLS1Q9UJA2 301 aa21.95■■□□□ 1.1
SHMT1-203ENST00000354098 PCYT1BQ9Y5K3 369 aaPredicted RBP21.95■■□□□ 1.1
SHMT1-203ENST00000354098 TP53BP1Q12888 1972 aaPredicted RBP21.94■■□□□ 1.1
SHMT1-203ENST00000354098 CDX4O14627 284 aaPredicted RBP21.94■■□□□ 1.1
SHMT1-203ENST00000354098 USP1O94782 785 aa21.94■■□□□ 1.1
SHMT1-203ENST00000354098 CSF2P04141 144 aa21.94■■□□□ 1.1
SHMT1-203ENST00000354098 PGAM1P18669 254 aa21.94■■□□□ 1.1
SHMT1-203ENST00000354098 ARCN1P48444 511 aaKnown RBP21.94■■□□□ 1.1
SHMT1-203ENST00000354098 ATXN3P54252 364 aaPredicted RBP21.94■■□□□ 1.1
SHMT1-203ENST00000354098 PPARDQ03181 441 aa21.94■■□□□ 1.1
SHMT1-203ENST00000354098 AASDHQ4L235 1098 aaPredicted RBP21.94■■□□□ 1.1
SHMT1-203ENST00000354098 AFTPHQ6ULP2 937 aa21.94■■□□□ 1.1
SHMT1-203ENST00000354098 CENPUQ71F23 418 aa21.94■■□□□ 1.1
SHMT1-203ENST00000354098 ADGRG6Q86SQ4 1221 aa21.94■■□□□ 1.1
SHMT1-203ENST00000354098 HID1Q8IV36 788 aa21.94■■□□□ 1.1
SHMT1-203ENST00000354098 ZBED8Q8IZ13 594 aa21.94■■□□□ 1.1
SHMT1-203ENST00000354098 RBFAQ8N0V3 343 aa21.94■■□□□ 1.1
SHMT1-203ENST00000354098 NAT14Q8WUY8 206 aa21.94■■□□□ 1.1
SHMT1-203ENST00000354098 EDEM2Q9BV94 578 aa21.94■■□□□ 1.1
SHMT1-203ENST00000354098 OR2AG1Q9H205 316 aa21.94■■□□□ 1.1
SHMT1-203ENST00000354098 CYP4F12Q9HCS2 524 aa21.94■■□□□ 1.1
SHMT1-203ENST00000354098 TRBV5-4A0A0C4DH59 114 aa21.93■■□□□ 1.1
SHMT1-203ENST00000354098 PRSS38A1L453 326 aa21.93■■□□□ 1.1
SHMT1-203ENST00000354098 TNFRSF10CO14798 259 aa21.93■■□□□ 1.1
SHMT1-203ENST00000354098 POLBP06746 335 aa21.93■■□□□ 1.1
SHMT1-203ENST00000354098 ECHS1P30084 290 aa21.93■■□□□ 1.1
SHMT1-203ENST00000354098 BNIP3Q12983 259 aa21.93■■□□□ 1.1
SHMT1-203ENST00000354098 CBLBQ13191 982 aa21.93■■□□□ 1.1
SHMT1-203ENST00000354098 SEMA3AQ14563 771 aa21.93■■□□□ 1.1
SHMT1-203ENST00000354098 GPR33Q49SQ1 333 aa21.93■■□□□ 1.1
SHMT1-203ENST00000354098 KIAA0930Q6ICG6 404 aaPredicted RBP21.93■■□□□ 1.1
SHMT1-203ENST00000354098 SERPINA9Q86WD7 417 aa21.93■■□□□ 1.1
SHMT1-203ENST00000354098 CCDC25Q86WR0 208 aa21.93■■□□□ 1.1
SHMT1-203ENST00000354098 UNC5BQ8IZJ1 945 aa21.93■■□□□ 1.1
SHMT1-203ENST00000354098 NXPE1Q8N323 547 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms