RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 FAM149AA5PLN7 773 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 USP17L5A8MUK1 530 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 KCNU1A8MYU2 1149 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 HPRP00739 348 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 CYP1A1P04798 512 aaPredicted RBP5.01□□□□□ -1.61
SKP1-202ENST00000353411 GM2AP17900 193 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 BTDP43251 543 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 NDST2P52849 883 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 NOMO3P69849 1222 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 SLC13A2Q13183 592 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 CSHL1Q14406 222 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 NOMO1Q15155 1222 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 NR6A1Q15406 480 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 KCNA10Q16322 511 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 KYAT1Q16773 422 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 COL28A1Q2UY09 1125 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 GPAT3Q53EU6 434 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 ATAD3CQ5T2N8 411 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 IL31Q6EBC2 164 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 DHRS4L2Q6PKH6 230 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 LACC1Q8IV20 430 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 TXLNGYQ9BZA5 131 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 KCNN2Q9H2S1 579 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 ACTR8Q9H981 624 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 A8MV72 311 aaPredicted RBP5.01□□□□□ -1.61
SKP1-202ENST00000353411 MSI1O43347 362 aaKnown RBP5.01□□□□□ -1.61
SKP1-202ENST00000353411 FTH1P02794 183 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 GNAO1P09471 354 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 PTPN5P54829 565 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 CDKL1Q00532 357 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 LSM12Q3MHD2 195 aaKnown RBP5.01□□□□□ -1.61
SKP1-202ENST00000353411 VASH1Q7L8A9 365 aaPredicted RBP5.01□□□□□ -1.61
SKP1-202ENST00000353411 CPSF7Q8N684 471 aaKnown RBP5.01□□□□□ -1.61
SKP1-202ENST00000353411 OR56A4Q8NGH8 313 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 SPPL2AQ8TCT8 520 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 LGALS12Q96DT0 336 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 EBF4Q9BQW3 602 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 FUNDC2Q9BWH2 189 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 ACTR6Q9GZN1 396 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 IL22Q9GZX6 179 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 OR51B5Q9H339 312 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 SIAEQ9HAT2 523 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 KCNK13Q9HB14 408 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 ATP13A2Q9NQ11 1180 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 SNX15Q9NRS6 342 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.01□□□□□ -1.61
SKP1-202ENST00000353411 NOD1Q9Y239 953 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 CMAHPQ9Y471 501 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 HMBSP08397 361 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 USP17L8P0C7I0 530 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 CFL1P23528 166 aaKnown RBP5.01□□□□□ -1.61
SKP1-202ENST00000353411 HTR7P34969 479 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 PPP3CCP48454 512 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 MXD4Q14582 209 aaPredicted RBP5.01□□□□□ -1.61
SKP1-202ENST00000353411 OXA1LQ15070 435 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 SBK1Q52WX2 424 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 DCAF15Q66K64 600 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 SSX9Q7RTT3 188 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 MFSD2AQ8NA29 543 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 C3orf58Q8NDZ4 430 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 DENND6BQ8NEG7 585 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 RFT1Q96AA3 541 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 CLIP3Q96DZ5 547 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 BORCS6Q96GS4 357 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 PPIL3Q9H2H8 161 aaKnown RBP5.01□□□□□ -1.61
SKP1-202ENST00000353411 PRMT8Q9NR22 394 aaPredicted RBP5.01□□□□□ -1.61
SKP1-202ENST00000353411 LOC100130705A0A1B0GUX0 176 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 A0A1B0GVI7 797 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 FOXO6A8MYZ6 492 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 PMPCBO75439 489 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 SLC22A3O75751 556 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 CAPN15O75808 1086 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 OR5F1O95221 314 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 EVI2BP34910 448 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 SCNN1AP37088 669 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 RAB4BP61018 213 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 RPS3AP61247 264 aaKnown RBP5.01□□□□□ -1.61
SKP1-202ENST00000353411 CBLBQ13191 982 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 BIKQ13323 160 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 SNAPC2Q13487 334 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 FAM98CQ17RN3 349 aaKnown RBP5.01□□□□□ -1.61
SKP1-202ENST00000353411 C3orf33Q6P1S2 294 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 OTOP3Q7RTS5 596 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 TRPV3Q8NET8 790 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 OR5K1Q8NHB7 308 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 SH3RF3Q8TEJ3 882 aaPredicted RBP5.01□□□□□ -1.61
SKP1-202ENST00000353411 PHF10Q8WUB8 498 aaKnown RBP5.01□□□□□ -1.61
SKP1-202ENST00000353411 DPF3Q92784 378 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 PTERQ96BW5 349 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 NLNQ9BYT8 704 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 ZNF436Q9C0F3 470 aaPredicted RBP5.01□□□□□ -1.61
SKP1-202ENST00000353411 NIF3L1Q9GZT8 377 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 ADGRE2Q9UHX3 823 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 ZNRF3Q9ULT6 936 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 ALKQ9UM73 1620 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 COL3A1P02461 1466 aaPredicted RBP5.01□□□□□ -1.61
SKP1-202ENST00000353411 KIDINS220Q9ULH0 1771 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 ANKDD1BA6NHY2 528 aa5.01□□□□□ -1.61
SKP1-202ENST00000353411 EEF2KO00418 725 aaKnown RBP5.01□□□□□ -1.61
SKP1-202ENST00000353411 FOXD2O60548 495 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms