RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 C1QTNF3Q9BXJ4 246 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 SYTL2Q9HCH5 934 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 ABI2Q9NYB9 513 aaPredicted RBP24.37■■□□□ 1.49
CPNE1-202ENST00000352393 PCDHB8Q9UN66 801 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 TIMM22Q9Y584 194 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 LCHNA4D1U4 455 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 SNAP91O60641 907 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 PRSS56P0CW18 603 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 UMPSP11172 480 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 NCK1P16333 377 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 CD52P31358 61 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 ENTPD1P49961 510 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 FXNQ16595 210 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 RAP1GAP2Q684P5 730 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 PAQR3Q6TCH7 311 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 USP51Q70EK9 711 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 SERINC5Q86VE9 423 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 IFNEQ86WN2 208 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 OFCC1Q8IZS5 231 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 ATP6V0D2Q8N8Y2 350 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 HSPBAP1Q96EW2 488 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 SLC30A3Q99726 388 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 CXorf21Q9HAI6 301 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 GMIPQ9P107 970 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 PADI3Q9ULW8 664 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 CRCPO75575 148 aa24.36■■□□□ 1.49
CPNE1-202ENST00000352393 BAIAP3O94812 1187 aa24.36■■□□□ 1.49
CPNE1-202ENST00000352393 RHOBTB1O94844 696 aa24.36■■□□□ 1.49
CPNE1-202ENST00000352393 PIRTP0C851 137 aa24.36■■□□□ 1.49
CPNE1-202ENST00000352393 DCKP27707 260 aa24.36■■□□□ 1.49
CPNE1-202ENST00000352393 RPS9P46781 194 aaKnown RBP24.36■■□□□ 1.49
CPNE1-202ENST00000352393 GPR15P49685 360 aa24.36■■□□□ 1.49
CPNE1-202ENST00000352393 TMED1Q13445 227 aa24.36■■□□□ 1.49
CPNE1-202ENST00000352393 DSC3Q14574 896 aa24.36■■□□□ 1.49
CPNE1-202ENST00000352393 TSNQ15631 228 aaKnown RBP24.36■■□□□ 1.49
CPNE1-202ENST00000352393 SYVN1Q86TM6 617 aa24.36■■□□□ 1.49
CPNE1-202ENST00000352393 CIR1Q86X95 450 aaPredicted RBP24.36■■□□□ 1.49
CPNE1-202ENST00000352393 TMEM199Q8N511 208 aa24.36■■□□□ 1.49
CPNE1-202ENST00000352393 DHRSXQ8N5I4 330 aa24.36■■□□□ 1.49
CPNE1-202ENST00000352393 BTN2A3PQ96KV6 586 aa24.36■■□□□ 1.49
CPNE1-202ENST00000352393 PLEKHG4BQ96PX9 1271 aa24.36■■□□□ 1.49
CPNE1-202ENST00000352393 LEF1Q9UJU2 399 aaPredicted RBP24.36■■□□□ 1.49
CPNE1-202ENST00000352393 FAF1Q9UNN5 650 aaPredicted RBP24.36■■□□□ 1.49
CPNE1-202ENST00000352393 A0A0U1RQF3 1178 aa24.35■■□□□ 1.49
CPNE1-202ENST00000352393 KANSL1LA0AUZ9 987 aa24.35■■□□□ 1.49
CPNE1-202ENST00000352393 TYW5A2RUC4 315 aaKnown RBP24.35■■□□□ 1.49
CPNE1-202ENST00000352393 DRGXA6NNA5 263 aa24.35■■□□□ 1.49
CPNE1-202ENST00000352393 TTKP33981 857 aa24.35■■□□□ 1.49
CPNE1-202ENST00000352393 ACVRL1P37023 503 aa24.35■■□□□ 1.49
CPNE1-202ENST00000352393 EFEMP1Q12805 493 aa24.35■■□□□ 1.49
CPNE1-202ENST00000352393 PMS2P3Q13401 168 aa24.35■■□□□ 1.49
CPNE1-202ENST00000352393 STX16O14662 325 aa24.35■■□□□ 1.49
CPNE1-202ENST00000352393 KLK8O60259 260 aa24.35■■□□□ 1.49
CPNE1-202ENST00000352393 PRAMEF11O60813 436 aa24.35■■□□□ 1.49
CPNE1-202ENST00000352393 C1RP00736 705 aa24.35■■□□□ 1.49
CPNE1-202ENST00000352393 PRDX3P30048 256 aaKnown RBP24.35■■□□□ 1.49
CPNE1-202ENST00000352393 PDCD4Q53EL6 469 aaKnown RBP24.35■■□□□ 1.49
CPNE1-202ENST00000352393 FBXO48Q5FWF7 155 aa24.35■■□□□ 1.49
CPNE1-202ENST00000352393 EFL1Q7Z2Z2 1120 aaKnown RBP24.35■■□□□ 1.49
CPNE1-202ENST00000352393 FUBP1Q96AE4 644 aaKnown RBP24.35■■□□□ 1.49
CPNE1-202ENST00000352393 CDKN2AIPNLQ96HQ2 116 aa24.35■■□□□ 1.49
CPNE1-202ENST00000352393 RPL10LQ96L21 214 aaKnown RBP24.35■■□□□ 1.49
CPNE1-202ENST00000352393 SYT17Q9BSW7 474 aa24.35■■□□□ 1.49
CPNE1-202ENST00000352393 MTG1Q9BT17 334 aaPredicted RBP24.35■■□□□ 1.49
CPNE1-202ENST00000352393 DCUN1D5Q9BTE7 237 aa24.35■■□□□ 1.49
CPNE1-202ENST00000352393 RPF2Q9H7B2 306 aaKnown RBP24.35■■□□□ 1.49
CPNE1-202ENST00000352393 ZNF225Q9UK10 706 aa24.35■■□□□ 1.49
CPNE1-202ENST00000352393 H3BMQ9 156 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 ATE1O95260 518 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 HRH2P25021 359 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 ZNF140P52738 457 aaPredicted RBP24.34■■□□□ 1.49
CPNE1-202ENST00000352393 NAA20P61599 178 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 UFM1P61960 85 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 ADARB1P78563 741 aaKnown RBP24.34■■□□□ 1.49
CPNE1-202ENST00000352393 RAD51Q06609 339 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 ZNF235Q14590 738 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 RAB39AQ14964 217 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 AASDHQ4L235 1098 aaPredicted RBP24.34■■□□□ 1.49
CPNE1-202ENST00000352393 ELMSAN1Q6PJG2 1045 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 LRRC43Q8N309 656 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 OSCP1Q8WVF1 389 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 PPP1R14BQ96C90 147 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 COG8Q96MW5 612 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 TRIB3Q96RU7 358 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 FBXO44Q9H4M3 255 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 TAS2R13Q9NYV9 303 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 PCTPQ9UKL6 214 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 FAM50BQ9Y247 325 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 CHD5Q8TDI0 1954 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 UBA6A0AVT1 1052 aaPredicted RBP24.34■■□□□ 1.49
CPNE1-202ENST00000352393 SH3PXD2BA1X283 911 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 CCDC154A6NI56 674 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 SYCE1LA8MT33 242 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 CDC7O00311 574 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 SLC22A3O75751 556 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 ESRRBO95718 433 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 LDLRP01130 860 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 HTR1EP28566 365 aa24.34■■□□□ 1.49
CPNE1-202ENST00000352393 TRIP4Q15650 581 aaPredicted RBP24.34■■□□□ 1.49
CPNE1-202ENST00000352393 DDR2Q16832 855 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms