RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 MASP1P48740 699 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 MAP3K7CLP57077 242 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 ZNF45Q02386 682 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 RAD51Q06609 339 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 INCA1Q0VD86 236 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 PPP1R8Q12972 351 aaKnown RBP13.18□□□□□ -0.3
IFT88-202ENST00000351808 ITPK1Q13572 414 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 DSC3Q14574 896 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 C5orf22Q49AR2 442 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 ZNF484Q5JVG2 852 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 PRMT9Q6P2P2 845 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.18□□□□□ -0.3
IFT88-202ENST00000351808 DPY19L3Q6ZPD9 716 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 ABI1Q8IZP0 508 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 CENPLQ8N0S6 344 aaPredicted RBP13.18□□□□□ -0.3
IFT88-202ENST00000351808 NPLOC4Q8TAT6 608 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 ITCHQ96J02 903 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 NTPCRQ9BSD7 190 aaKnown RBP13.18□□□□□ -0.3
IFT88-202ENST00000351808 FEM1AQ9BSK4 669 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 POMKQ9H5K3 350 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 KAT8Q9H7Z6 458 aaKnown RBP13.18□□□□□ -0.3
IFT88-202ENST00000351808 ANKHQ9HCJ1 492 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 NUFIP1Q9UHK0 495 aaKnown RBP13.18□□□□□ -0.3
IFT88-202ENST00000351808 EVLQ9UI08 416 aaPredicted RBP13.18□□□□□ -0.3
IFT88-202ENST00000351808 TFECO14948 347 aaPredicted RBP13.18□□□□□ -0.3
IFT88-202ENST00000351808 CAPN5O15484 640 aaPredicted RBP13.18□□□□□ -0.3
IFT88-202ENST00000351808 NPHS1O60500 1241 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 KCNJ13O60928 360 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 SLITRK5O94991 958 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 GOT2P00505 430 aaKnown RBP13.18□□□□□ -0.3
IFT88-202ENST00000351808 ASS1P00966 412 aaKnown RBP13.18□□□□□ -0.3
IFT88-202ENST00000351808 DNTTP04053 509 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 UMPSP11172 480 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 GPD1P21695 349 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 CYP2F1P24903 491 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 FMO3P31513 532 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 CD83Q01151 205 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 LIPEQ05469 1076 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 STARD3Q14849 445 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 TRIP4Q15650 581 aaPredicted RBP13.18□□□□□ -0.3
IFT88-202ENST00000351808 CLEC6AQ6EIG7 209 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 BPIFB1Q8TDL5 484 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 PPP1R13LQ8WUF5 828 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 PIWIL1Q96J94 861 aaKnown RBP13.18□□□□□ -0.3
IFT88-202ENST00000351808 CNPY3Q9BT09 278 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 FAM49BQ9NUQ9 324 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 NYAP2Q9P242 653 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 GIMAP2Q9UG22 337 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 AP3M1Q9Y2T2 418 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 NDUFAF1Q9Y375 327 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 IPPQ9Y573 584 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 PCDHGB1Q9Y5G3 927 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 HMX3A6NHT5 357 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 SPATA31C2B4DYI2 1134 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 SLC35E2BP0CK96 405 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 B2MP61769 119 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 IL1RL1Q01638 556 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 NOL9Q5SY16 702 aaKnown RBP13.17□□□□□ -0.3
IFT88-202ENST00000351808 GJC2Q5T442 439 aaPredicted RBP13.17□□□□□ -0.3
IFT88-202ENST00000351808 SYT6Q5T7P8 510 aaPredicted RBP13.17□□□□□ -0.3
IFT88-202ENST00000351808 SYCE2Q6PIF2 218 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 EFL1Q7Z2Z2 1120 aaKnown RBP13.17□□□□□ -0.3
IFT88-202ENST00000351808 RAB43Q86YS6 212 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 ZDHHC13Q8IUH4 622 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 OR4M1Q8NGD0 313 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 OR52K1Q8NGK4 314 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 SEPT1Q8WYJ6 367 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 LGMNQ99538 433 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 CGRRF1Q99675 332 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 TM9SF2Q99805 663 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 RHNO1Q9BSD3 238 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 UCK2Q9BZX2 261 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 TNKS2Q9H2K2 1166 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 MFHAS1Q9Y4C4 1052 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 PCDHA9Q9Y5H5 950 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 MICAL3Q7RTP6 2002 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 ARID2Q68CP9 1835 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 ADGRA2Q96PE1 1338 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 SRCAPQ6ZRS2 3230 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 CNTNAP1P78357 1384 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 MEIOCA2RUB1 952 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 PRMT5O14744 637 aaPredicted RBP13.17□□□□□ -0.3
IFT88-202ENST00000351808 MED26O95402 600 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 PSMB4P28070 264 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 SNRPD2P62316 118 aaKnown RBP13.17□□□□□ -0.3
IFT88-202ENST00000351808 IL31Q6EBC2 164 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 EID3Q8N140 333 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 HTR3CQ8WXA8 447 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 TMEM74Q96NL1 305 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 SNRNP25Q9BV90 132 aaKnown RBP13.17□□□□□ -0.3
IFT88-202ENST00000351808 DIABLOQ9NR28 239 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 ERVK13-1Q9NX77 482 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 INVSQ9Y283 1065 aa13.17□□□□□ -0.3
IFT88-202ENST00000351808 A0A0A0MRY4 1105 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 LOC100130705A0A1B0GUX0 176 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 G3V2T6 193 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 AGRPO00253 132 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 AKR7A2O43488 359 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 TSPAN8P19075 237 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 IL5RAQ01344 420 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms