RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 CFAP157Q5JU67 520 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 TCHHL1Q5QJ38 904 aaPredicted RBP13.34□□□□□ -0.27
UBA3-201ENST00000349511 LYSMD3Q7Z3D4 306 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 SLC41A1Q8IVJ1 513 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 MFSD6LQ8IWD5 586 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 FBXW8Q8N3Y1 598 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 HIPK4Q8NE63 616 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 MAPK15Q8TD08 544 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 EID2BQ96D98 161 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 MRGPRX3Q96LB0 322 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 UNKQ9C0B0 810 aaKnown RBP13.34□□□□□ -0.27
UBA3-201ENST00000349511 POLR3BQ9NW08 1133 aaPredicted RBP13.34□□□□□ -0.27
UBA3-201ENST00000349511 CRYL1Q9Y2S2 319 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 E9PBE3 544 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 PHGDHO43175 533 aaKnown RBP13.34□□□□□ -0.27
UBA3-201ENST00000349511 HOXC11O43248 304 aaPredicted RBP13.34□□□□□ -0.27
UBA3-201ENST00000349511 KLHL41O60662 606 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 HLA-EP13747 358 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 SERPINA4P29622 427 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 GDI1P31150 447 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 ZNF140P52738 457 aaPredicted RBP13.34□□□□□ -0.27
UBA3-201ENST00000349511 TAF1AQ15573 450 aaPredicted RBP13.34□□□□□ -0.27
UBA3-201ENST00000349511 PTPRNQ16849 979 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 RBM20Q5T481 1227 aaKnown RBP13.34□□□□□ -0.27
UBA3-201ENST00000349511 CWF19L1Q69YN2 538 aaKnown RBP13.34□□□□□ -0.27
UBA3-201ENST00000349511 KIAA0907Q7Z7F0 614 aaPredicted RBP13.34□□□□□ -0.27
UBA3-201ENST00000349511 CLEC14AQ86T13 490 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 CNTN4Q8IWV2 1026 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 ETFBKMTQ8IXQ9 262 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 YAF2Q8IY57 180 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 GALNT15Q8N3T1 639 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 C2CD4AQ8NCU7 369 aaPredicted RBP13.34□□□□□ -0.27
UBA3-201ENST00000349511 OR2A12Q8NGT7 310 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 STYXQ8WUJ0 223 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 SH3GL3Q99963 347 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 MCMBPQ9BTE3 642 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 SLC2A11Q9BYW1 496 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 GPR63Q9BZJ6 419 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 KLHL4Q9C0H6 718 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 PRO3102Q9H379 93 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 TRPV4Q9HBA0 871 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 DEC1Q9P2X7 70 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 FKBPLQ9UIM3 349 aa13.34□□□□□ -0.27
UBA3-201ENST00000349511 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.33□□□□□ -0.28
UBA3-201ENST00000349511 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.33□□□□□ -0.28
UBA3-201ENST00000349511 TMEM114B3SHH9 223 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 WASH3PC4AMC7 463 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 RPP40O75818 363 aaKnown RBP13.33□□□□□ -0.28
UBA3-201ENST00000349511 CLDN7O95471 211 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 C2P06681 752 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 LPOP22079 712 aaPredicted RBP13.33□□□□□ -0.28
UBA3-201ENST00000349511 HNF1BP35680 557 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 NNMTP40261 264 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 USP10Q14694 798 aaKnown RBP13.33□□□□□ -0.28
UBA3-201ENST00000349511 METTL3Q86U44 580 aaKnown RBP13.33□□□□□ -0.28
UBA3-201ENST00000349511 TSPAN33Q86UF1 283 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 CILP2Q8IUL8 1156 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 SPATA6LQ8N4H0 392 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 ZNF557Q8N988 423 aaPredicted RBP13.33□□□□□ -0.28
UBA3-201ENST00000349511 OR4L1Q8NH43 312 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 AGR3Q8TD06 166 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 OR52B2Q96RD2 323 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 FAM192AQ9GZU8 254 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 MFSD1Q9H3U5 465 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 RHOJQ9H4E5 214 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 SUV39H2Q9H5I1 410 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 ELOVL2Q9NXB9 296 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 COL6A3P12111 3177 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 C1orf232A0A0U1RR37 186 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 FAM95CA0A1B0GW59 222 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 STX7O15400 261 aaKnown RBP13.33□□□□□ -0.28
UBA3-201ENST00000349511 CD3EAPO15446 510 aaKnown RBP13.33□□□□□ -0.28
UBA3-201ENST00000349511 SLC7A4O43246 635 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 HTRA2O43464 458 aaPredicted RBP13.33□□□□□ -0.28
UBA3-201ENST00000349511 TIMM44O43615 452 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 TRIM13O60858 407 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 PSMC3P17980 439 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 PEX2P28328 305 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 RECQLP46063 649 aaPredicted RBP13.33□□□□□ -0.28
UBA3-201ENST00000349511 SOX9P48436 509 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 CSE1LP55060 971 aaKnown RBP13.33□□□□□ -0.28
UBA3-201ENST00000349511 MTTPP55157 894 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 POLE2P56282 527 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 SATB1Q01826 763 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 ROR2Q01974 943 aaKnown RBP13.33□□□□□ -0.28
UBA3-201ENST00000349511 FCHO2Q0JRZ9 810 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 RUNX3Q13761 415 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 DMC1Q14565 340 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 ACAD11Q709F0 780 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 CEP97Q8IW35 865 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 PCDH20Q8N6Y1 951 aaKnown RBP13.33□□□□□ -0.28
UBA3-201ENST00000349511 FRS2Q8WU20 508 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 NAT14Q8WUY8 206 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 ISG20Q96AZ6 181 aaKnown RBP13.33□□□□□ -0.28
UBA3-201ENST00000349511 ELMO2Q96JJ3 720 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 KLHL32Q96NJ5 620 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 RTKNQ9BST9 563 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 VCX3BQ9H321 246 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 NMRAL1Q9HBL8 299 aa13.33□□□□□ -0.28
UBA3-201ENST00000349511 NLE1Q9NVX2 485 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms