RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 UGT1A6P19224 532 aa18.52■□□□□ 0.56
PTN-201ENST00000348225 UGT1A1P22309 533 aa18.52■□□□□ 0.56
PTN-201ENST00000348225 UGT1A4P22310 534 aa18.52■□□□□ 0.56
PTN-201ENST00000348225 CTHP32929 405 aa18.52■□□□□ 0.56
PTN-201ENST00000348225 UGT1A3P35503 534 aa18.52■□□□□ 0.56
PTN-201ENST00000348225 UGT1A5P35504 534 aa18.52■□□□□ 0.56
PTN-201ENST00000348225 LIPMQ5VYY2 423 aa18.52■□□□□ 0.56
PTN-201ENST00000348225 PTRHD1Q6GMV3 140 aaKnown RBP18.52■□□□□ 0.56
PTN-201ENST00000348225 FOXR1Q6PIV2 292 aa18.52■□□□□ 0.56
PTN-201ENST00000348225 TMEM207Q6UWW9 146 aa18.52■□□□□ 0.56
PTN-201ENST00000348225 ZCCHC23Q6ZST2 131 aa18.52■□□□□ 0.56
PTN-201ENST00000348225 HSD11B1LQ7Z5J1 315 aa18.52■□□□□ 0.56
PTN-201ENST00000348225 TMEM151AQ8N4L1 468 aa18.52■□□□□ 0.56
PTN-201ENST00000348225 NKAPQ8N5F7 415 aaKnown RBP18.52■□□□□ 0.56
PTN-201ENST00000348225 ANKRD49Q8WVL7 239 aa18.52■□□□□ 0.56
PTN-201ENST00000348225 ACOX2Q99424 681 aa18.52■□□□□ 0.56
PTN-201ENST00000348225 GPR21Q99679 349 aa18.52■□□□□ 0.56
PTN-201ENST00000348225 FBRSL1Q9HCM7 1045 aaKnown RBP18.52■□□□□ 0.56
PTN-201ENST00000348225 OXSMQ9NWU1 459 aa18.52■□□□□ 0.56
PTN-201ENST00000348225 ZDHHC3Q9NYG2 299 aa18.52■□□□□ 0.56
PTN-201ENST00000348225 KLHL14Q9P2G3 628 aa18.52■□□□□ 0.56
PTN-201ENST00000348225 ARL2BPQ9Y2Y0 163 aa18.52■□□□□ 0.56
PTN-201ENST00000348225 TARM1B6A8C7 271 aa18.52■□□□□ 0.55
PTN-201ENST00000348225 MBTPS2O43462 519 aa18.52■□□□□ 0.55
PTN-201ENST00000348225 RNASEH1O60930 286 aaKnown RBP18.52■□□□□ 0.55
PTN-201ENST00000348225 NIPSNAP2O75323 286 aa18.52■□□□□ 0.55
PTN-201ENST00000348225 CHRM3P20309 590 aa18.52■□□□□ 0.55
PTN-201ENST00000348225 OCRLQ01968 901 aa18.52■□□□□ 0.55
PTN-201ENST00000348225 ATP13A5Q4VNC0 1218 aa18.52■□□□□ 0.55
PTN-201ENST00000348225 RALGPS2Q86X27 583 aaPredicted RBP18.52■□□□□ 0.55
PTN-201ENST00000348225 CRLF3Q8IUI8 442 aa18.52■□□□□ 0.55
PTN-201ENST00000348225 MMAAQ8IVH4 418 aaKnown RBP18.52■□□□□ 0.55
PTN-201ENST00000348225 DNASE1L2Q92874 299 aa18.52■□□□□ 0.55
PTN-201ENST00000348225 CCDC126Q96EE4 140 aa18.52■□□□□ 0.55
PTN-201ENST00000348225 COPS8Q99627 209 aa18.52■□□□□ 0.55
PTN-201ENST00000348225 SPATA16Q9BXB7 569 aa18.52■□□□□ 0.55
PTN-201ENST00000348225 TRIM55Q9BYV6 548 aa18.52■□□□□ 0.55
PTN-201ENST00000348225 C8orf33Q9H7E9 229 aaPredicted RBP18.52■□□□□ 0.55
PTN-201ENST00000348225 SMOXQ9NWM0 555 aa18.52■□□□□ 0.55
PTN-201ENST00000348225 MED16Q9Y2X0 877 aa18.52■□□□□ 0.55
PTN-201ENST00000348225 BRWD1Q9NSI6 2320 aa18.51■□□□□ 0.55
PTN-201ENST00000348225 F8W8V4 182 aa18.51■□□□□ 0.55
PTN-201ENST00000348225 SBK3P0C264 359 aa18.51■□□□□ 0.55
PTN-201ENST00000348225 ADRB3P13945 408 aa18.51■□□□□ 0.55
PTN-201ENST00000348225 CD1DP15813 335 aa18.51■□□□□ 0.55
PTN-201ENST00000348225 TFEBP19484 476 aa18.51■□□□□ 0.55
PTN-201ENST00000348225 NSG1P42857 185 aa18.51■□□□□ 0.55
PTN-201ENST00000348225 PSMD8P48556 350 aa18.51■□□□□ 0.55
PTN-201ENST00000348225 ATP6V0D1P61421 351 aa18.51■□□□□ 0.55
PTN-201ENST00000348225 ZNF284Q2VY69 593 aa18.51■□□□□ 0.55
PTN-201ENST00000348225 PAQR3Q6TCH7 311 aa18.51■□□□□ 0.55
PTN-201ENST00000348225 LIPIQ6XZB0 460 aa18.51■□□□□ 0.55
PTN-201ENST00000348225 RFLNAQ6ZTI6 216 aa18.51■□□□□ 0.55
PTN-201ENST00000348225 ERN2Q76MJ5 926 aaKnown RBP18.51■□□□□ 0.55
PTN-201ENST00000348225 NRSN1Q8IZ57 195 aa18.51■□□□□ 0.55
PTN-201ENST00000348225 TRAM1L1Q8N609 369 aa18.51■□□□□ 0.55
PTN-201ENST00000348225 PPP4R1Q8TF05 950 aa18.51■□□□□ 0.55
PTN-201ENST00000348225 RAB7BQ96AH8 199 aa18.51■□□□□ 0.55
PTN-201ENST00000348225 FAM136AQ96C01 138 aa18.51■□□□□ 0.55
PTN-201ENST00000348225 ZSCAN5AQ9BUG6 496 aa18.51■□□□□ 0.55
PTN-201ENST00000348225 HDAC8Q9BY41 377 aa18.51■□□□□ 0.55
PTN-201ENST00000348225 UNKQ9C0B0 810 aaKnown RBP18.51■□□□□ 0.55
PTN-201ENST00000348225 DERL2Q9GZP9 239 aa18.51■□□□□ 0.55
PTN-201ENST00000348225 ZDHHC4Q9NPG8 344 aa18.51■□□□□ 0.55
PTN-201ENST00000348225 CD84Q9UIB8 345 aa18.51■□□□□ 0.55
PTN-201ENST00000348225 PLXNA2O75051 1894 aa18.51■□□□□ 0.55
PTN-201ENST00000348225 COL4A2P08572 1712 aa18.51■□□□□ 0.55
PTN-201ENST00000348225 TMEM114B3SHH9 223 aa18.5■□□□□ 0.55
PTN-201ENST00000348225 K7EQS6 105 aa18.5■□□□□ 0.55
PTN-201ENST00000348225 SYNCRIPO60506 623 aaKnown RBP18.5■□□□□ 0.55
PTN-201ENST00000348225 ATP5F1P24539 256 aaPredicted RBP18.5■□□□□ 0.55
PTN-201ENST00000348225 ETV3P41162 512 aa18.5■□□□□ 0.55
PTN-201ENST00000348225 KIR2DL1P43626 348 aaPredicted RBP18.5■□□□□ 0.55
PTN-201ENST00000348225 SLC1A6P48664 564 aa18.5■□□□□ 0.55
PTN-201ENST00000348225 PFKPQ01813 784 aa18.5■□□□□ 0.55
PTN-201ENST00000348225 SF3A3Q12874 501 aaKnown RBP eCLIP18.5■□□□□ 0.55
PTN-201ENST00000348225 ACOX1Q15067 660 aa18.5■□□□□ 0.55
PTN-201ENST00000348225 SKIV2LQ15477 1246 aaKnown RBP18.5■□□□□ 0.55
PTN-201ENST00000348225 SDE2Q6IQ49 451 aa18.5■□□□□ 0.55
PTN-201ENST00000348225 MACC1Q6ZN28 852 aa18.5■□□□□ 0.55
PTN-201ENST00000348225 Q6ZVL8 140 aa18.5■□□□□ 0.55
PTN-201ENST00000348225 KCNV2Q8TDN2 545 aa18.5■□□□□ 0.55
PTN-201ENST00000348225 BOCQ9BWV1 1114 aa18.5■□□□□ 0.55
PTN-201ENST00000348225 KCNK12Q9HB15 430 aa18.5■□□□□ 0.55
PTN-201ENST00000348225 NPHS2Q9NP85 383 aa18.5■□□□□ 0.55
PTN-201ENST00000348225 PIAS3Q9Y6X2 628 aa18.5■□□□□ 0.55
PTN-201ENST00000348225 XIRP2A4UGR9 3374 aa18.5■□□□□ 0.55
PTN-201ENST00000348225 PLXNB3Q9ULL4 1909 aa18.5■□□□□ 0.55
PTN-201ENST00000348225 SOX1O00570 391 aaPredicted RBP18.49■□□□□ 0.55
PTN-201ENST00000348225 WNT9AO14904 365 aa18.49■□□□□ 0.55
PTN-201ENST00000348225 CA5AP35218 305 aa18.49■□□□□ 0.55
PTN-201ENST00000348225 TIE1P35590 1138 aa18.49■□□□□ 0.55
PTN-201ENST00000348225 LIG3P49916 1009 aa18.49■□□□□ 0.55
PTN-201ENST00000348225 METAP1P53582 386 aa18.49■□□□□ 0.55
PTN-201ENST00000348225 SEC13P55735 322 aa18.49■□□□□ 0.55
PTN-201ENST00000348225 ABCE1P61221 599 aaKnown RBP18.49■□□□□ 0.55
PTN-201ENST00000348225 OVGP1Q12889 678 aa18.49■□□□□ 0.55
PTN-201ENST00000348225 CAMK2GQ13555 558 aaPredicted RBP18.49■□□□□ 0.55
PTN-201ENST00000348225 SETMARQ53H47 684 aaPredicted RBP18.49■□□□□ 0.55
PTN-201ENST00000348225 HENMT1Q5T8I9 393 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms