RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 LINC00271P0C7V0 271 aa21.19■□□□□ 0.98
PTPN18-202ENST00000347849 CKMT2P17540 419 aa21.19■□□□□ 0.98
PTPN18-202ENST00000347849 RPL10P27635 214 aaKnown RBP21.19■□□□□ 0.98
PTPN18-202ENST00000347849 ALDH3B2P48448 385 aa21.19■□□□□ 0.98
PTPN18-202ENST00000347849 PRAMEP78395 509 aa21.19■□□□□ 0.98
PTPN18-202ENST00000347849 STX5Q13190 355 aa21.19■□□□□ 0.98
PTPN18-202ENST00000347849 CARNMT1Q8N4J0 409 aa21.19■□□□□ 0.98
PTPN18-202ENST00000347849 HEXDCQ8WVB3 486 aa21.19■□□□□ 0.98
PTPN18-202ENST00000347849 MAELQ96JY0 434 aaKnown RBP21.19■□□□□ 0.98
PTPN18-202ENST00000347849 ZBED2Q9BTP6 218 aa21.19■□□□□ 0.98
PTPN18-202ENST00000347849 NCKIPSDQ9NZQ3 722 aa21.19■□□□□ 0.98
PTPN18-202ENST00000347849 CRYL1Q9Y2S2 319 aa21.19■□□□□ 0.98
PTPN18-202ENST00000347849 CPQQ9Y646 472 aa21.19■□□□□ 0.98
PTPN18-202ENST00000347849 NEMP2A6NFY4 417 aa21.18■□□□□ 0.98
PTPN18-202ENST00000347849 H0YJX3 145 aa21.18■□□□□ 0.98
PTPN18-202ENST00000347849 FBP2O00757 339 aa21.18■□□□□ 0.98
PTPN18-202ENST00000347849 FGF18O76093 207 aa21.18■□□□□ 0.98
PTPN18-202ENST00000347849 S1PR4O95977 384 aa21.18■□□□□ 0.98
PTPN18-202ENST00000347849 LRP8Q14114 963 aa21.18■□□□□ 0.98
PTPN18-202ENST00000347849 AGKQ53H12 422 aa21.18■□□□□ 0.98
PTPN18-202ENST00000347849 TRIM74Q86UV6 250 aa21.18■□□□□ 0.98
PTPN18-202ENST00000347849 TRIM73Q86UV7 250 aa21.18■□□□□ 0.98
PTPN18-202ENST00000347849 HMGCLL1Q8TB92 370 aa21.18■□□□□ 0.98
PTPN18-202ENST00000347849 RMND5BQ96G75 393 aaPredicted RBP21.18■□□□□ 0.98
PTPN18-202ENST00000347849 CACNA2D2Q9NY47 1150 aa21.18■□□□□ 0.98
PTPN18-202ENST00000347849 GOT2P00505 430 aaKnown RBP21.18■□□□□ 0.98
PTPN18-202ENST00000347849 CDKN2DP55273 166 aa21.18■□□□□ 0.98
PTPN18-202ENST00000347849 KLHL35Q6PF15 583 aa21.18■□□□□ 0.98
PTPN18-202ENST00000347849 TRIM67Q6ZTA4 783 aa21.18■□□□□ 0.98
PTPN18-202ENST00000347849 PELI3Q8N2H9 469 aa21.18■□□□□ 0.98
PTPN18-202ENST00000347849 RIN3Q8TB24 985 aa21.18■□□□□ 0.98
PTPN18-202ENST00000347849 SNRNP27Q8WVK2 155 aaKnown RBP21.18■□□□□ 0.98
PTPN18-202ENST00000347849 ANKRD49Q8WVL7 239 aa21.18■□□□□ 0.98
PTPN18-202ENST00000347849 MFSD1Q9H3U5 465 aa21.18■□□□□ 0.98
PTPN18-202ENST00000347849 CCDC162PA2VCL2 907 aa21.17■□□□□ 0.98
PTPN18-202ENST00000347849 SLC7A4O43246 635 aa21.17■□□□□ 0.98
PTPN18-202ENST00000347849 FGF1P05230 155 aa21.17■□□□□ 0.98
PTPN18-202ENST00000347849 HLA-DPA1P20036 260 aa21.17■□□□□ 0.98
PTPN18-202ENST00000347849 STT3AP46977 705 aa21.17■□□□□ 0.98
PTPN18-202ENST00000347849 CSHL1Q14406 222 aa21.17■□□□□ 0.98
PTPN18-202ENST00000347849 PPP1R3AQ16821 1122 aa21.17■□□□□ 0.98
PTPN18-202ENST00000347849 HMBOX1Q6NT76 420 aa21.17■□□□□ 0.98
PTPN18-202ENST00000347849 TMEM207Q6UWW9 146 aa21.17■□□□□ 0.98
PTPN18-202ENST00000347849 ZBTB49Q6ZSB9 765 aa21.17■□□□□ 0.98
PTPN18-202ENST00000347849 CHST9Q7L1S5 443 aa21.17■□□□□ 0.98
PTPN18-202ENST00000347849 PIM3Q86V86 326 aa21.17■□□□□ 0.98
PTPN18-202ENST00000347849 TXNDC5Q8NBS9 432 aaKnown RBP21.17■□□□□ 0.98
PTPN18-202ENST00000347849 POMKQ9H5K3 350 aa21.17■□□□□ 0.98
PTPN18-202ENST00000347849 MRPL40Q9NQ50 206 aaKnown RBP21.17■□□□□ 0.98
PTPN18-202ENST00000347849 IGSF5Q9NSI5 407 aa21.17■□□□□ 0.98
PTPN18-202ENST00000347849 PNPLA3Q9NST1 481 aa21.17■□□□□ 0.98
PTPN18-202ENST00000347849 TRIM24O15164 1050 aa21.17■□□□□ 0.98
PTPN18-202ENST00000347849 INSIG1O15503 277 aa21.17■□□□□ 0.98
PTPN18-202ENST00000347849 EPOP01588 193 aa21.17■□□□□ 0.98
PTPN18-202ENST00000347849 SLC4A1P02730 911 aa21.17■□□□□ 0.98
PTPN18-202ENST00000347849 COL6A2P12110 1019 aa21.17■□□□□ 0.98
PTPN18-202ENST00000347849 GABRR2P28476 465 aa21.17■□□□□ 0.98
PTPN18-202ENST00000347849 FASTKQ14296 549 aaKnown RBP21.17■□□□□ 0.98
PTPN18-202ENST00000347849 REP15Q6BDI9 236 aa21.17■□□□□ 0.98
PTPN18-202ENST00000347849 DUS1LQ6P1R4 473 aaKnown RBP21.17■□□□□ 0.98
PTPN18-202ENST00000347849 KIAA0408Q6ZU52 694 aa21.17■□□□□ 0.98
PTPN18-202ENST00000347849 RPS27LQ71UM5 84 aaKnown RBP21.17■□□□□ 0.98
PTPN18-202ENST00000347849 KLHL23Q8NBE8 558 aa21.17■□□□□ 0.98
PTPN18-202ENST00000347849 STON2Q8WXE9 905 aa21.17■□□□□ 0.98
PTPN18-202ENST00000347849 STOML2Q9UJZ1 356 aa21.17■□□□□ 0.98
PTPN18-202ENST00000347849 PSMD12O00232 456 aaPredicted RBP21.16■□□□□ 0.98
PTPN18-202ENST00000347849 HTRA2O43464 458 aaPredicted RBP21.16■□□□□ 0.98
PTPN18-202ENST00000347849 TIPRLO75663 272 aa21.16■□□□□ 0.98
PTPN18-202ENST00000347849 NDST3O95803 873 aa21.16■□□□□ 0.98
PTPN18-202ENST00000347849 MT-CO1P00395 513 aa21.16■□□□□ 0.98
PTPN18-202ENST00000347849 PSMD8P48556 350 aa21.16■□□□□ 0.98
PTPN18-202ENST00000347849 POU4F1Q01851 419 aa21.16■□□□□ 0.98
PTPN18-202ENST00000347849 HECTD2Q5U5R9 776 aa21.16■□□□□ 0.98
PTPN18-202ENST00000347849 MDGA1Q8NFP4 955 aa21.16■□□□□ 0.98
PTPN18-202ENST00000347849 BRSK1Q8TDC3 778 aa21.16■□□□□ 0.98
PTPN18-202ENST00000347849 CYP4F12Q9HCS2 524 aa21.16■□□□□ 0.98
PTPN18-202ENST00000347849 FAF1Q9UNN5 650 aaPredicted RBP21.16■□□□□ 0.98
PTPN18-202ENST00000347849 H0Y626 953 aa21.16■□□□□ 0.98
PTPN18-202ENST00000347849 UBDO15205 165 aa21.16■□□□□ 0.98
PTPN18-202ENST00000347849 NPHS1O60500 1241 aa21.16■□□□□ 0.98
PTPN18-202ENST00000347849 SLC7A1P30825 629 aa21.16■□□□□ 0.98
PTPN18-202ENST00000347849 ACVR1Q04771 509 aa21.16■□□□□ 0.98
PTPN18-202ENST00000347849 FAM219BQ5XKK7 198 aa21.16■□□□□ 0.98
PTPN18-202ENST00000347849 ZNF549Q6P9A3 640 aa21.16■□□□□ 0.98
PTPN18-202ENST00000347849 RMDN1Q96DB5 314 aa21.16■□□□□ 0.98
PTPN18-202ENST00000347849 ZBP1Q9H171 429 aa21.16■□□□□ 0.98
PTPN18-202ENST00000347849 MRPL46Q9H2W6 279 aaKnown RBP21.16■□□□□ 0.98
PTPN18-202ENST00000347849 SPAG4Q9NPE6 437 aa21.16■□□□□ 0.98
PTPN18-202ENST00000347849 CLEC4EQ9ULY5 219 aa21.16■□□□□ 0.98
PTPN18-202ENST00000347849 ZBBXA8MT70 800 aa21.15■□□□□ 0.98
PTPN18-202ENST00000347849 K7ERQ8 282 aa21.15■□□□□ 0.98
PTPN18-202ENST00000347849 GPC4O75487 556 aa21.15■□□□□ 0.98
PTPN18-202ENST00000347849 HNRNPCP07910 306 aaKnown RBP eCLIP21.15■□□□□ 0.98
PTPN18-202ENST00000347849 KCNA5P22460 613 aa21.15■□□□□ 0.98
PTPN18-202ENST00000347849 C1QTNF8P60827 252 aa21.15■□□□□ 0.98
PTPN18-202ENST00000347849 SULT2A1Q06520 285 aa21.15■□□□□ 0.98
PTPN18-202ENST00000347849 FAM47BQ8NA70 645 aa21.15■□□□□ 0.98
PTPN18-202ENST00000347849 CALML6Q8TD86 181 aa21.15■□□□□ 0.98
PTPN18-202ENST00000347849 TDRD1Q9BXT4 1180 aaKnown RBP21.15■□□□□ 0.98
PTPN18-202ENST00000347849 SMG9Q9H0W8 520 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms