RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 REXO4Q9GZR2 422 aaKnown RBP14.66□□□□□ -0.06
NUP50-201ENST00000347635 TMCC3Q9ULS5 477 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 CCL5P13501 91 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 BCL2L1Q07817 233 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 SLC10A2Q12908 348 aaPredicted RBP14.66□□□□□ -0.06
NUP50-201ENST00000347635 CRY1Q16526 586 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 CRTC3Q6UUV7 619 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 CANT1Q8WVQ1 401 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 POP5Q969H6 163 aaKnown RBP14.66□□□□□ -0.06
NUP50-201ENST00000347635 FUBP3Q96I24 572 aaKnown RBP eCLIP14.66□□□□□ -0.06
NUP50-201ENST00000347635 TBATAQ96M53 351 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 PHF12Q96QT6 1004 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 CORO1BQ9BR76 489 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 TMEM175Q9BSA9 504 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 CEP44Q9C0F1 390 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 PNMA8CA0A1B0GUJ8 204 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 TULP3O75386 442 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 OR6B1O95007 311 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 CLTBP09497 229 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 LPOP22079 712 aaPredicted RBP14.66□□□□□ -0.06
NUP50-201ENST00000347635 TLR1Q15399 786 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 ZNF605Q86T29 641 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 SLCO6A1Q86UG4 719 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 SYT12Q8IV01 421 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 KCTD13Q8WZ19 329 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 GATA6Q92908 595 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 INTS10Q9NVR2 710 aaKnown RBP14.66□□□□□ -0.06
NUP50-201ENST00000347635 RPS6KA6Q9UK32 745 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 F8W810 466 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 SLC7A4O43246 635 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 CCR10P46092 362 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 ZBED5Q49AG3 693 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 EGFLAMQ63HQ2 1017 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 SYTL1Q8IYJ3 562 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 DBF4BQ8NFT6 615 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 SELENOMQ8WWX9 145 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 FCRL3Q96P31 734 aaPredicted RBP14.66□□□□□ -0.06
NUP50-201ENST00000347635 SLC39A8Q9C0K1 460 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 ARL15Q9NXU5 204 aa14.66□□□□□ -0.06
NUP50-201ENST00000347635 TAF1P21675 1872 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 UBXN8O00124 270 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 TLR5O60602 858 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 ALOX5P09917 674 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 UROSP10746 265 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 ACADMP11310 421 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 ZNF12P17014 697 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 MC4RP32245 332 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 CHRNA4P43681 627 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 CDK9P50750 372 aaKnown RBP14.65□□□□□ -0.06
NUP50-201ENST00000347635 HERVK_113P63132 956 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 ARMC12Q5T9G4 340 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 OGFRL1Q5TC84 451 aaPredicted RBP14.65□□□□□ -0.06
NUP50-201ENST00000347635 CNKSR3Q6P9H4 555 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 OTULINQ96BN8 352 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 ERVK-6Q9BXR3 956 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 CD320Q9NPF0 282 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 RNF186Q9NXI6 227 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 CACNA2D2Q9NY47 1150 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 IFRD1O00458 451 aaPredicted RBP14.65□□□□□ -0.06
NUP50-201ENST00000347635 EPB42P16452 691 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 SERPINA4P29622 427 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 UBE3AQ05086 875 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 RAB6CQ53S08 254 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 SPANXN2Q5MJ10 180 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 SDHAF4Q5VUM1 108 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 RTL3Q8N8U3 475 aaKnown RBP14.65□□□□□ -0.06
NUP50-201ENST00000347635 RBM4BQ9BQ04 359 aaKnown RBP14.65□□□□□ -0.06
NUP50-201ENST00000347635 RBM4Q9BWF3 364 aaKnown RBP14.65□□□□□ -0.06
NUP50-201ENST00000347635 RAB6CQ9H0N0 254 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 KLHL3Q9UH77 587 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 LINC00854A0A1B0GVQ3 168 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 MYBPHLA2RUH7 354 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 HCRTO43612 131 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 CLCNKBP51801 687 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 C16orf59Q7L2K0 433 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 PPP1R16AQ96I34 528 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 IGFLR1Q9H665 355 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 SLC28A3Q9HAS3 691 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 PREBQ9HCU5 417 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 TRNAU1APQ9NX07 287 aaKnown RBP14.65□□□□□ -0.06
NUP50-201ENST00000347635 PNMA8BQ9ULN7 279 aaPredicted RBP14.65□□□□□ -0.06
NUP50-201ENST00000347635 GOT2P00505 430 aaKnown RBP14.65□□□□□ -0.06
NUP50-201ENST00000347635 ABCB1P08183 1280 aaPredicted RBP14.65□□□□□ -0.06
NUP50-201ENST00000347635 RHOQP17081 205 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 ARMC4Q5T2S8 1044 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 KBTBD2Q8IY47 623 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 ZHX1-C8orf76Q96EF9 292 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 OR52E6Q96RD3 313 aa14.65□□□□□ -0.06
NUP50-201ENST00000347635 A0A0U1RQF3 1178 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 DENRO43583 198 aaKnown RBP14.64□□□□□ -0.07
NUP50-201ENST00000347635 COX7A2P14406 83 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 CDH15P55291 814 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 TUBA4AP68366 448 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 GHRHRQ02643 423 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 PSMA8Q8TAA3 256 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 PLEKHA8Q96JA3 519 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 TBC1D14Q9P2M4 693 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 SNX6Q9UNH7 406 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 CAB39Q9Y376 341 aaPredicted RBP14.64□□□□□ -0.07
NUP50-201ENST00000347635 EI24O14681 340 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms