RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 GPR33Q49SQ1 333 aa18.84■□□□□ 0.61
CHMP4A-201ENST00000347519 USP39Q53GS9 565 aaKnown RBP18.84■□□□□ 0.61
CHMP4A-201ENST00000347519 GPRC6AQ5T6X5 926 aa18.84■□□□□ 0.61
CHMP4A-201ENST00000347519 TRIM74Q86UV6 250 aa18.84■□□□□ 0.61
CHMP4A-201ENST00000347519 LMNTD2Q8IXW0 634 aa18.84■□□□□ 0.61
CHMP4A-201ENST00000347519 CYP4X1Q8N118 509 aa18.84■□□□□ 0.61
CHMP4A-201ENST00000347519 BTN2A2Q8WVV5 523 aa18.84■□□□□ 0.61
CHMP4A-201ENST00000347519 LENG8Q96PV6 779 aaPredicted RBP18.84■□□□□ 0.61
CHMP4A-201ENST00000347519 CPNE1Q99829 537 aa18.84■□□□□ 0.61
CHMP4A-201ENST00000347519 CCDC77Q9BR77 488 aa18.84■□□□□ 0.61
CHMP4A-201ENST00000347519 SMOXQ9NWM0 555 aa18.84■□□□□ 0.61
CHMP4A-201ENST00000347519 OAS3Q9Y6K5 1087 aaKnown RBP18.84■□□□□ 0.61
CHMP4A-201ENST00000347519 HMX2A2RU54 273 aa18.83■□□□□ 0.61
CHMP4A-201ENST00000347519 FOXO6A8MYZ6 492 aa18.83■□□□□ 0.61
CHMP4A-201ENST00000347519 RASGRF2O14827 1237 aa18.83■□□□□ 0.61
CHMP4A-201ENST00000347519 NDUFS2O75306 463 aa18.83■□□□□ 0.61
CHMP4A-201ENST00000347519 GP5P40197 560 aa18.83■□□□□ 0.61
CHMP4A-201ENST00000347519 INPP5AQ14642 412 aa18.83■□□□□ 0.61
CHMP4A-201ENST00000347519 CEP85LQ5SZL2 805 aa18.83■□□□□ 0.61
CHMP4A-201ENST00000347519 ZNF549Q6P9A3 640 aa18.83■□□□□ 0.61
CHMP4A-201ENST00000347519 ADGRD1Q6QNK2 874 aa18.83■□□□□ 0.61
CHMP4A-201ENST00000347519 KIAA0408Q6ZU52 694 aa18.83■□□□□ 0.61
CHMP4A-201ENST00000347519 SDCCAG8Q86SQ7 713 aaPredicted RBP18.83■□□□□ 0.61
CHMP4A-201ENST00000347519 LONP2Q86WA8 852 aa18.83■□□□□ 0.61
CHMP4A-201ENST00000347519 ZC3HC1Q86WB0 502 aaKnown RBP18.83■□□□□ 0.61
CHMP4A-201ENST00000347519 SLC41A1Q8IVJ1 513 aa18.83■□□□□ 0.61
CHMP4A-201ENST00000347519 LPGAT1Q92604 370 aa18.83■□□□□ 0.61
CHMP4A-201ENST00000347519 GLYATL1Q969I3 302 aa18.83■□□□□ 0.61
CHMP4A-201ENST00000347519 ATXN7L3BQ96GX2 97 aa18.83■□□□□ 0.61
CHMP4A-201ENST00000347519 VPS35Q96QK1 796 aa18.83■□□□□ 0.61
CHMP4A-201ENST00000347519 RBBP8Q99708 897 aa18.83■□□□□ 0.61
CHMP4A-201ENST00000347519 LGR4Q9BXB1 951 aa18.83■□□□□ 0.61
CHMP4A-201ENST00000347519 VIPAS39Q9H9C1 493 aa18.83■□□□□ 0.61
CHMP4A-201ENST00000347519 FETUBQ9UGM5 382 aa18.83■□□□□ 0.61
CHMP4A-201ENST00000347519 SLC24A2Q9UI40 661 aa18.83■□□□□ 0.61
CHMP4A-201ENST00000347519 CRYL1Q9Y2S2 319 aa18.83■□□□□ 0.61
CHMP4A-201ENST00000347519 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.83■□□□□ 0.61
CHMP4A-201ENST00000347519 PRSS21Q9Y6M0 314 aa18.83■□□□□ 0.61
CHMP4A-201ENST00000347519 THADAQ6YHU6 1953 aa18.83■□□□□ 0.6
CHMP4A-201ENST00000347519 POM121BA6NF01 834 aa18.82■□□□□ 0.6
CHMP4A-201ENST00000347519 METTL12A8MUP2 240 aa18.82■□□□□ 0.6
CHMP4A-201ENST00000347519 NDUFS3O75489 264 aa18.82■□□□□ 0.6
CHMP4A-201ENST00000347519 INHBAP08476 426 aa18.82■□□□□ 0.6
CHMP4A-201ENST00000347519 PMLP29590 882 aa18.82■□□□□ 0.6
CHMP4A-201ENST00000347519 EIF3BP55884 814 aaKnown RBP18.82■□□□□ 0.6
CHMP4A-201ENST00000347519 RPL6Q02878 288 aaKnown RBP18.82■□□□□ 0.6
CHMP4A-201ENST00000347519 BMPR2Q13873 1038 aa18.82■□□□□ 0.6
CHMP4A-201ENST00000347519 RBM20Q5T481 1227 aaKnown RBP18.82■□□□□ 0.6
CHMP4A-201ENST00000347519 ADAMTSL4Q6UY14 1074 aa18.82■□□□□ 0.6
CHMP4A-201ENST00000347519 TDRPQ86YL5 185 aa18.82■□□□□ 0.6
CHMP4A-201ENST00000347519 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.82■□□□□ 0.6
CHMP4A-201ENST00000347519 ULK4Q96C45 1275 aa18.82■□□□□ 0.6
CHMP4A-201ENST00000347519 SPACA7Q96KW9 195 aa18.82■□□□□ 0.6
CHMP4A-201ENST00000347519 BMFQ96LC9 184 aa18.82■□□□□ 0.6
CHMP4A-201ENST00000347519 TCF12Q99081 682 aa18.82■□□□□ 0.6
CHMP4A-201ENST00000347519 ROPN1BQ9BZX4 212 aaPredicted RBP18.82■□□□□ 0.6
CHMP4A-201ENST00000347519 ROPN1Q9HAT0 212 aaPredicted RBP18.82■□□□□ 0.6
CHMP4A-201ENST00000347519 KCTD5Q9NXV2 234 aa18.82■□□□□ 0.6
CHMP4A-201ENST00000347519 ZDHHC3Q9NYG2 299 aa18.82■□□□□ 0.6
CHMP4A-201ENST00000347519 TBK1Q9UHD2 729 aa18.82■□□□□ 0.6
CHMP4A-201ENST00000347519 FBXO4Q9UKT5 387 aa18.82■□□□□ 0.6
CHMP4A-201ENST00000347519 MTO1Q9Y2Z2 717 aaKnown RBP18.82■□□□□ 0.6
CHMP4A-201ENST00000347519 OR1A2Q9Y585 309 aa18.82■□□□□ 0.6
CHMP4A-201ENST00000347519 IGLV3-16A0A075B6K0 115 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 H0Y8X5 98 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 HNRNPA2B1P22626 353 aaKnown RBP18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 CD151P48509 253 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 TTPAP49638 278 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 PGGT1BP53609 377 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 CSE1LP55060 971 aaKnown RBP18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 KRT71Q3SY84 523 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 AARS2Q5JTZ9 985 aaKnown RBP18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 GRTP1Q5TC63 336 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 SLC36A4Q6YBV0 504 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 CERS6Q6ZMG9 384 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 GCNT7Q6ZNI0 430 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 GALNT7Q86SF2 657 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 HEATR4Q86WZ0 1026 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 TMEFF1Q8IYR6 380 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 DDHD1Q8NEL9 900 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 SNX19Q92543 992 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 NELL1Q92832 810 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 COX14Q96I36 57 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 C1QTNF7Q9BXJ2 289 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 TEX101Q9BY14 249 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 P2RY12Q9H244 342 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 KCNH6Q9H252 994 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 RHOJQ9H4E5 214 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 INTS10Q9NVR2 710 aaKnown RBP18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 NSMCE4AQ9NXX6 385 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 PSMC3IPQ9P2W1 217 aaPredicted RBP18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 PIKFYVEQ9Y2I7 2098 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 UBA6A0AVT1 1052 aaPredicted RBP18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 HRO43593 1189 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 SLC25A14O95258 325 aaPredicted RBP18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 IVLP07476 585 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 MAOBP27338 520 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 TEAD1P28347 426 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 FMO4P31512 558 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms