RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 JUNBP17275 347 aaPredicted RBP17.69■□□□□ 0.42
VHL-202ENST00000345392 ITKQ08881 620 aa17.69■□□□□ 0.42
VHL-202ENST00000345392 HABP4Q5JVS0 413 aaKnown RBP17.69■□□□□ 0.42
VHL-202ENST00000345392 PTRH1Q86Y79 214 aaKnown RBP17.69■□□□□ 0.42
VHL-202ENST00000345392 SPARTQ8N0X7 666 aa17.69■□□□□ 0.42
VHL-202ENST00000345392 TOP6BLQ8N6T0 577 aa17.69■□□□□ 0.42
VHL-202ENST00000345392 PAPD5Q8NDF8 572 aaKnown RBP17.69■□□□□ 0.42
VHL-202ENST00000345392 SH3YL1Q96HL8 342 aaPredicted RBP17.69■□□□□ 0.42
VHL-202ENST00000345392 ALPK1Q96QP1 1244 aa17.69■□□□□ 0.42
VHL-202ENST00000345392 FUNDC2Q9BWH2 189 aa17.69■□□□□ 0.42
VHL-202ENST00000345392 RGS18Q9NS28 235 aa17.69■□□□□ 0.42
VHL-202ENST00000345392 GPR45Q9Y5Y3 372 aa17.69■□□□□ 0.42
VHL-202ENST00000345392 H0YAE9 185 aa17.68■□□□□ 0.42
VHL-202ENST00000345392 AXIN1O15169 862 aa17.68■□□□□ 0.42
VHL-202ENST00000345392 TREHO43280 583 aa17.68■□□□□ 0.42
VHL-202ENST00000345392 BCAS1O75363 584 aaPredicted RBP17.68■□□□□ 0.42
VHL-202ENST00000345392 FGF4P08620 206 aa17.68■□□□□ 0.42
VHL-202ENST00000345392 CD1DP15813 335 aa17.68■□□□□ 0.42
VHL-202ENST00000345392 CRHBPP24387 322 aa17.68■□□□□ 0.42
VHL-202ENST00000345392 IST1P53990 364 aa17.68■□□□□ 0.42
VHL-202ENST00000345392 FSCN1Q16658 493 aaKnown RBP17.68■□□□□ 0.42
VHL-202ENST00000345392 TIGD2Q4W5G0 525 aa17.68■□□□□ 0.42
VHL-202ENST00000345392 KANK2Q63ZY3 851 aa17.68■□□□□ 0.42
VHL-202ENST00000345392 CRTC3Q6UUV7 619 aa17.68■□□□□ 0.42
VHL-202ENST00000345392 TMBIM1Q969X1 311 aa17.68■□□□□ 0.42
VHL-202ENST00000345392 MPP6Q9NZW5 540 aa17.68■□□□□ 0.42
VHL-202ENST00000345392 SEPT3Q9UH03 358 aa17.68■□□□□ 0.42
VHL-202ENST00000345392 IPPQ9Y573 584 aa17.68■□□□□ 0.42
VHL-202ENST00000345392 C1RP00736 705 aa17.68■□□□□ 0.42
VHL-202ENST00000345392 MTHFD2P13995 350 aa17.68■□□□□ 0.42
VHL-202ENST00000345392 PTPRCAPQ14761 206 aa17.68■□□□□ 0.42
VHL-202ENST00000345392 MEP1AQ16819 746 aa17.68■□□□□ 0.42
VHL-202ENST00000345392 UBXN11Q5T124 520 aa17.68■□□□□ 0.42
VHL-202ENST00000345392 CCDC117Q8IWD4 279 aaPredicted RBP17.68■□□□□ 0.42
VHL-202ENST00000345392 OSCP1Q8WVF1 389 aa17.68■□□□□ 0.42
VHL-202ENST00000345392 FAM32AQ9Y421 112 aaKnown RBP17.68■□□□□ 0.42
VHL-202ENST00000345392 UPK1AO00322 258 aa17.67■□□□□ 0.42
VHL-202ENST00000345392 KPNA4O00629 521 aaPredicted RBP17.67■□□□□ 0.42
VHL-202ENST00000345392 MAN1A2O60476 641 aa17.67■□□□□ 0.42
VHL-202ENST00000345392 WISP3O95389 354 aaPredicted RBP17.67■□□□□ 0.42
VHL-202ENST00000345392 GSTT2P0CG29 244 aa17.67■□□□□ 0.42
VHL-202ENST00000345392 GSTT2BP0CG30 244 aa17.67■□□□□ 0.42
VHL-202ENST00000345392 SERPINH1P50454 418 aaKnown RBP17.67■□□□□ 0.42
VHL-202ENST00000345392 SNX17Q15036 470 aa17.67■□□□□ 0.42
VHL-202ENST00000345392 OXA1LQ15070 435 aa17.67■□□□□ 0.42
VHL-202ENST00000345392 ANKRD34AQ69YU3 496 aa17.67■□□□□ 0.42
VHL-202ENST00000345392 GLYATQ6IB77 296 aa17.67■□□□□ 0.42
VHL-202ENST00000345392 NUDT8Q8WV74 236 aa17.67■□□□□ 0.42
VHL-202ENST00000345392 ZNF347Q96SE7 839 aa17.67■□□□□ 0.42
VHL-202ENST00000345392 PCDH12Q9NPG4 1184 aa17.67■□□□□ 0.42
VHL-202ENST00000345392 GMIPQ9P107 970 aa17.67■□□□□ 0.42
VHL-202ENST00000345392 B3GNT3Q9Y2A9 372 aa17.67■□□□□ 0.42
VHL-202ENST00000345392 PCDHGA8Q9Y5G5 932 aa17.67■□□□□ 0.42
VHL-202ENST00000345392 CCDC154A6NI56 674 aa17.67■□□□□ 0.42
VHL-202ENST00000345392 CRCPO75575 148 aa17.67■□□□□ 0.42
VHL-202ENST00000345392 CYBBP04839 570 aa17.67■□□□□ 0.42
VHL-202ENST00000345392 UMPSP11172 480 aa17.67■□□□□ 0.42
VHL-202ENST00000345392 HTR1BP28222 390 aa17.67■□□□□ 0.42
VHL-202ENST00000345392 PRDX3P30048 256 aaKnown RBP17.67■□□□□ 0.42
VHL-202ENST00000345392 ZFP36L2P47974 494 aaKnown RBP17.67■□□□□ 0.42
VHL-202ENST00000345392 ALDH3A2P51648 485 aa17.67■□□□□ 0.42
VHL-202ENST00000345392 PLIN5Q00G26 463 aa17.67■□□□□ 0.42
VHL-202ENST00000345392 PAN2Q504Q3 1202 aaKnown RBP17.67■□□□□ 0.42
VHL-202ENST00000345392 ZNF362Q5T0B9 420 aaPredicted RBP17.67■□□□□ 0.42
VHL-202ENST00000345392 THAP5Q7Z6K1 395 aa17.67■□□□□ 0.42
VHL-202ENST00000345392 FKBP10Q96AY3 582 aa17.67■□□□□ 0.42
VHL-202ENST00000345392 SMURF2Q9HAU4 748 aa17.67■□□□□ 0.42
VHL-202ENST00000345392 FNDC1Q4ZHG4 1894 aaPredicted RBP17.67■□□□□ 0.42
VHL-202ENST00000345392 PTGESO14684 152 aa17.66■□□□□ 0.42
VHL-202ENST00000345392 GABRDO14764 452 aa17.66■□□□□ 0.42
VHL-202ENST00000345392 NOBOXO60393 691 aa17.66■□□□□ 0.42
VHL-202ENST00000345392 CNTN5O94779 1100 aa17.66■□□□□ 0.42
VHL-202ENST00000345392 ALPLP05186 524 aa17.66■□□□□ 0.42
VHL-202ENST00000345392 HTR1AP08908 422 aa17.66■□□□□ 0.42
VHL-202ENST00000345392 THRBP10828 461 aa17.66■□□□□ 0.42
VHL-202ENST00000345392 HPCAL1P37235 193 aa17.66■□□□□ 0.42
VHL-202ENST00000345392 CD86P42081 329 aa17.66■□□□□ 0.42
VHL-202ENST00000345392 ZNF33AQ06730 810 aa17.66■□□□□ 0.42
VHL-202ENST00000345392 FOXM1Q08050 763 aa17.66■□□□□ 0.42
VHL-202ENST00000345392 PPP1R8Q12972 351 aaKnown RBP17.66■□□□□ 0.42
VHL-202ENST00000345392 TUBA3CQ13748 450 aa17.66■□□□□ 0.42
VHL-202ENST00000345392 RALGAPA2Q2PPJ7 1873 aa17.66■□□□□ 0.42
VHL-202ENST00000345392 PLA2G4EQ3MJ16 856 aa17.66■□□□□ 0.42
VHL-202ENST00000345392 DUSP28Q4G0W2 176 aa17.66■□□□□ 0.42
VHL-202ENST00000345392 AASDHQ4L235 1098 aaPredicted RBP17.66■□□□□ 0.42
VHL-202ENST00000345392 RAB41Q5JT25 222 aa17.66■□□□□ 0.42
VHL-202ENST00000345392 TWF2Q6IBS0 349 aaKnown RBP17.66■□□□□ 0.42
VHL-202ENST00000345392 ZNF549Q6P9A3 640 aa17.66■□□□□ 0.42
VHL-202ENST00000345392 RAB44Q7Z6P3 723 aaPredicted RBP17.66■□□□□ 0.42
VHL-202ENST00000345392 HS3ST5Q8IZT8 346 aa17.66■□□□□ 0.42
VHL-202ENST00000345392 CADM3Q8N126 398 aa17.66■□□□□ 0.42
VHL-202ENST00000345392 BPIFB1Q8TDL5 484 aa17.66■□□□□ 0.42
VHL-202ENST00000345392 ITPKCQ96DU7 683 aa17.66■□□□□ 0.42
VHL-202ENST00000345392 TOR3AQ9H497 397 aa17.66■□□□□ 0.42
VHL-202ENST00000345392 ATAD3AQ9NVI7 634 aa17.66■□□□□ 0.42
VHL-202ENST00000345392 NUDT5Q9UKK9 219 aa17.66■□□□□ 0.42
VHL-202ENST00000345392 RBMX2Q9Y388 322 aaKnown RBP17.66■□□□□ 0.42
VHL-202ENST00000345392 CLDN25C9JDP6 229 aa17.66■□□□□ 0.42
VHL-202ENST00000345392 PDHXO00330 501 aa17.66■□□□□ 0.42
VHL-202ENST00000345392 MSI1O43347 362 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms