RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 COX7A2P14406 83 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 TCEA1P23193 301 aaKnown RBP6.14□□□□□ -1.43
VCAN-203ENST00000343200 KLRC1P26715 233 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 KLK7P49862 253 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 MTHFSDQ2M296 383 aaKnown RBP6.14□□□□□ -1.43
VCAN-203ENST00000343200 GADL1Q6ZQY3 521 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 KBTBD6Q86V97 674 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 TICAM1Q8IUC6 712 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 CCDC54Q8NEL0 328 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 OR8K5Q8NH50 307 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 ACOX2Q99424 681 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 TBCDQ9BTW9 1192 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 SPON2Q9BUD6 331 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 TAS2R13Q9NYV9 303 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 GULP1Q9UBP9 304 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 CYP1A1P04798 512 aaPredicted RBP6.14□□□□□ -1.43
VCAN-203ENST00000343200 UCHL1P09936 223 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 SERPINF1P36955 418 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 BCL2A1Q16548 175 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 ZNF674Q2M3X9 581 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 PLEKHN1Q494U1 663 aaPredicted RBP6.14□□□□□ -1.43
VCAN-203ENST00000343200 FAM153CQ494X1 144 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 KLHL22Q53GT1 634 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 IDNKQ5T6J7 187 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 FAM171BQ6P995 826 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 CRTC1Q6UUV9 634 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 TRIM48Q8IWZ4 208 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 CCDC24Q8N4L8 307 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 PPP1R13LQ8WUF5 828 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 PAQR5Q9NXK6 330 aaPredicted RBP6.14□□□□□ -1.43
VCAN-203ENST00000343200 SAE1Q9UBE0 346 aaPredicted RBP6.14□□□□□ -1.43
VCAN-203ENST00000343200 ERVK-19Q9WJR5 959 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 MRC2Q9UBG0 1479 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 CPDO75976 1380 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 PNPLA7Q6ZV29 1317 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 OR6A2O95222 327 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 ALDH1A1P00352 501 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 GTF2F2P13984 249 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 RPS9P46781 194 aaKnown RBP6.14□□□□□ -1.43
VCAN-203ENST00000343200 CD151P48509 253 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 TLE3Q04726 772 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 PFKFB4Q16877 469 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 WDR72Q3MJ13 1102 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 C14orf28Q4W4Y0 310 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 FRRS1Q6ZNA5 592 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 CHST15Q7LFX5 561 aaPredicted RBP6.14□□□□□ -1.43
VCAN-203ENST00000343200 GPSM1Q86YR5 675 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 CBR4Q8N4T8 237 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 STK35Q8TDR2 534 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 NR4A3Q92570 626 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 DCSTAMPQ9H295 470 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 EBF2Q9HAK2 575 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 SUCOQ9UBS9 1254 aaKnown RBP6.14□□□□□ -1.43
VCAN-203ENST00000343200 ZNF175Q9Y473 711 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 DDX60Q8IY21 1712 aaKnown RBP6.14□□□□□ -1.43
VCAN-203ENST00000343200 MAGEC1O60732 1142 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 NUDT17P0C025 328 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 ADRA1DP25100 572 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 LIMK2P53671 638 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 ADGRE1Q14246 886 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 STARD3Q14849 445 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 NECTIN1Q15223 517 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 AP5B1Q2VPB7 878 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 TMEM126BQ8IUX1 230 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 PGAM4Q8N0Y7 254 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 STK40Q8N2I9 435 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 ACAD8Q9UKU7 415 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 ICKQ9UPZ9 632 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 ARHGEF28Q8N1W1 1705 aaKnown RBP6.14□□□□□ -1.43
VCAN-203ENST00000343200 FAM205CA6NFA0 338 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 RFPL1O75677 317 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 SLC25A12O75746 678 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 GRAP2O75791 330 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 PAK4O96013 591 aaPredicted RBP6.14□□□□□ -1.43
VCAN-203ENST00000343200 CAP2P40123 477 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 UAP1L1Q3KQV9 507 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 COLEC12Q5KU26 742 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 ANKRD23Q86SG2 305 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 CACUL1Q86Y37 369 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 SULF1Q8IWU6 871 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 MRPL41Q8IXM3 137 aaKnown RBP6.14□□□□□ -1.43
VCAN-203ENST00000343200 OR5T2Q8NGG2 359 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 KAT2BQ92831 832 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 TMEM203Q969S6 136 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 OTUB2Q96DC9 234 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 OR14A2Q96R54 314 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 TMED9Q9BVK6 235 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 ALG2Q9H553 416 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 NKIRAS2Q9NYR9 191 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 CAPN6Q9Y6Q1 641 aa6.14□□□□□ -1.43
VCAN-203ENST00000343200 A8MUI8 341 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 BTN3A1O00481 513 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 ACOX3O15254 700 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 AHSA1O95433 338 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 SCGB1D1O95968 90 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 MYCLP1P12525 358 aaPredicted RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 HOXA13P31271 388 aaPredicted RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 RNASE12Q5GAN4 147 aaKnown RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 MTFR2Q6P444 385 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 ALYREFQ86V81 257 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms