RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 GRIN3AQ8TCU5 1115 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 REXO5Q96IC2 774 aaKnown RBP12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 FCRL5Q96RD9 977 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 IPPKQ9H8X2 491 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 TPRKBQ9Y3C4 175 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 SMIM35A0A1B0GVV1 85 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 BTBD19C9JJ37 291 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 H3BNX3 289 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 PKMP14618 531 aaKnown RBP12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 IMPDH1P20839 514 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 LPOP22079 712 aaPredicted RBP12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 PBX3P40426 434 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 MRPS6P82932 125 aaKnown RBP12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 FAM174BQ3ZCQ3 159 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 PIGGQ5H8A4 983 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 FOXB2Q5VYV0 432 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 C14orf80Q86SX3 495 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 ARRDC4Q8NCT1 418 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 ZHX1-C8orf76Q96EF9 292 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 NDEL1Q9GZM8 345 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 FKBPLQ9UIM3 349 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 TMA7Q9Y2S6 64 aaKnown RBP12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 SAMHD1Q9Y3Z3 626 aaKnown RBP12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 SQORQ9Y6N5 450 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 NUMA1Q14980 2115 aa12.35□□□□□ -0.43
SNRNP48-201ENST00000342415 KLHL33A6NCF5 533 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 VPS4BO75351 444 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 DIRAS1O95057 198 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 ALDH2P05091 517 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 TFAP2AP05549 437 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 CAPGP40121 348 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 AGTR2P50052 363 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 ZNF135P52742 658 aaPredicted RBP12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 BRMS1LQ5PSV4 323 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 THAP5Q7Z6K1 395 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 ADGRG6Q86SQ4 1221 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 SYT12Q8IV01 421 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 MARVELD2Q8N4S9 558 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 GPR156Q8NFN8 814 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 TSEN34Q9BSV6 310 aaKnown RBP12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 CEP44Q9C0F1 390 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 USE1Q9NZ43 259 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 SOCS2O14508 198 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 CBFA2T3O75081 653 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 GNAO1P09471 354 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 KCNA5P22460 613 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 ELK4P28324 431 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 ACVRL1P37023 503 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 MYBPC1Q00872 1141 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 TRAF3Q13114 568 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 KRT33BQ14525 404 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 STARD3Q14849 445 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 TRIP4Q15650 581 aaPredicted RBP12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 SH3D19Q5HYK7 790 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 TRAF7Q6Q0C0 670 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 TMC5Q6UXY8 1006 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 KIAA0408Q6ZU52 694 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 MON1AQ86VX9 555 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 DRAXINQ8NBI3 349 aaPredicted RBP12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 COX4I2Q96KJ9 171 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 TMEM209Q96SK2 561 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 OLFM1Q99784 485 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 GPATCH1Q9BRR8 931 aaKnown RBP12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 TPK1Q9H3S4 243 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 RRAGCQ9HB90 399 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 TRPM5Q9NZQ8 1165 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 PADI3Q9ULW8 664 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 IGKV6D-21A0A0A0MT36 114 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 hCG_2039718K7EN88 272 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 RPP40O75818 363 aaKnown RBP12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 EPB42P16452 691 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 CD68P34810 354 aaPredicted RBP12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 GDF5P43026 501 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 ALDH7A1P49419 539 aaKnown RBP12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 CSTF3Q12996 717 aaKnown RBP12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 RTL3Q8N8U3 475 aaKnown RBP12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 RSPH1Q8WYR4 309 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 SLC47A1Q96FL8 570 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 FAM126AQ9BYI3 521 aaPredicted RBP12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 OCEL1Q9H607 264 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 SMURF2Q9HAU4 748 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 TBC1D30Q9Y2I9 924 aa12.34□□□□□ -0.43
SNRNP48-201ENST00000342415 PNMA8CA0A1B0GUJ8 204 aa12.33□□□□□ -0.43
SNRNP48-201ENST00000342415 IRAK2O43187 625 aa12.33□□□□□ -0.43
SNRNP48-201ENST00000342415 FGF1P05230 155 aa12.33□□□□□ -0.43
SNRNP48-201ENST00000342415 PRSS56P0CW18 603 aa12.33□□□□□ -0.43
SNRNP48-201ENST00000342415 AIF1P55008 147 aa12.33□□□□□ -0.43
SNRNP48-201ENST00000342415 HNRNPDQ14103 355 aaKnown RBP12.33□□□□□ -0.43
SNRNP48-201ENST00000342415 INTS6LQ5JSJ4 861 aaKnown RBP12.33□□□□□ -0.43
SNRNP48-201ENST00000342415 UGT2A3Q6UWM9 527 aa12.33□□□□□ -0.43
SNRNP48-201ENST00000342415 DEFB128Q7Z7B8 93 aa12.33□□□□□ -0.43
SNRNP48-201ENST00000342415 TMEM132CQ8N3T6 1108 aa12.33□□□□□ -0.43
SNRNP48-201ENST00000342415 KDM1BQ8NB78 822 aa12.33□□□□□ -0.43
SNRNP48-201ENST00000342415 OR52J3Q8NH60 311 aa12.33□□□□□ -0.43
SNRNP48-201ENST00000342415 APOLD1Q96LR9 279 aa12.33□□□□□ -0.43
SNRNP48-201ENST00000342415 PANX1Q96RD7 426 aa12.33□□□□□ -0.43
SNRNP48-201ENST00000342415 REEP1Q9H902 201 aa12.33□□□□□ -0.43
SNRNP48-201ENST00000342415 MKS1Q9NXB0 559 aa12.33□□□□□ -0.43
SNRNP48-201ENST00000342415 MARCH4Q9P2E8 410 aaPredicted RBP12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms