RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 RPS5P46782 204 aaKnown RBP18.42■□□□□ 0.54
SMPD1-201ENST00000342245 CACNB3P54284 484 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 VPS26BQ4G0F5 336 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 RAB6CQ53S08 254 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 NDUFAF5Q5TEU4 345 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 CYP20A1Q6UW02 462 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 LYPD8Q6UX82 237 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 ZNF767PQ75MW2 155 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 PSTKQ8IV42 348 aaKnown RBP18.42■□□□□ 0.54
SMPD1-201ENST00000342245 SLC22A9Q8IVM8 553 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.42■□□□□ 0.54
SMPD1-201ENST00000342245 ACVR1CQ8NER5 493 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 CITED4Q96RK1 184 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 NUAK2Q9H093 628 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 RAB6CQ9H0N0 254 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 ABI2Q9NYB9 513 aaPredicted RBP18.42■□□□□ 0.54
SMPD1-201ENST00000342245 LRIG2O94898 1065 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 ARHGEF15O94989 841 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 CAPN1P07384 714 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 IL7P13232 177 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 CAPN3P20807 821 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 AGXTP21549 392 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 CCNA1P78396 465 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 CAPRIN1Q14444 709 aaKnown RBP18.41■□□□□ 0.54
SMPD1-201ENST00000342245 ZC3H12BQ5HYM0 836 aaKnown RBP18.41■□□□□ 0.54
SMPD1-201ENST00000342245 NCBP2-AS2Q69YL0 99 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 LAIR2Q6ISS4 152 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 FAM183BPQ6ZVS7 135 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 RAB43Q86YS6 212 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 SYTL1Q8IYJ3 562 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 CACTIN-AS1Q8N1I8 211 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 OR52K1Q8NGK4 314 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 OMA1Q96E52 524 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 GAD1Q99259 594 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 TARS2Q9BW92 718 aaKnown RBP18.41■□□□□ 0.54
SMPD1-201ENST00000342245 DUSP21Q9H596 190 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 PLEKHA5Q9HAU0 1116 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 CASS4Q9NQ75 786 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 FAM49BQ9NUQ9 324 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 TAS2R9Q9NYW1 312 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 CCDC59Q9P031 241 aaKnown RBP18.41■□□□□ 0.54
SMPD1-201ENST00000342245 PCDHGB6Q9Y5F9 930 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 HSPE1-MOB4S4R3N1 261 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 ZFC3H1O60293 1989 aaKnown RBP18.41■□□□□ 0.54
SMPD1-201ENST00000342245 A0A0G2JMP0 313 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 SLC16A6O15403 523 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 AP2A1O95782 977 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 DNAJB2P25686 324 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 PSMB9P28065 219 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 ABCG1P45844 678 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 CLK1P49759 484 aaKnown RBP18.41■□□□□ 0.54
SMPD1-201ENST00000342245 GPR50Q13585 617 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 ARHGEF16Q5VV41 709 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 APOBEC3HQ6NTF7 200 aaKnown RBP18.41■□□□□ 0.54
SMPD1-201ENST00000342245 PRR23BQ6ZRT6 265 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 LPAR1Q92633 364 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 C19orf60Q96EN9 201 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 CSPG4P5Q96PW8 444 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 BCO2Q9BYV7 579 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 ACAD9Q9H845 621 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 PCDHGA10Q9Y5H3 936 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 ADAMTSL1Q8N6G6 1762 aa18.41■□□□□ 0.54
SMPD1-201ENST00000342245 UBR3Q6ZT12 1888 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 NPM3O75607 178 aaKnown RBP18.4■□□□□ 0.54
SMPD1-201ENST00000342245 IPO13O94829 963 aaKnown RBP18.4■□□□□ 0.54
SMPD1-201ENST00000342245 NPPAP01160 153 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 SAT1P21673 171 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 GTF2E2P29084 291 aaKnown RBP18.4■□□□□ 0.54
SMPD1-201ENST00000342245 TKTL1P51854 596 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 CHRNB3Q05901 458 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 CDK5R2Q13319 367 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 FAM83EQ2M2I3 478 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 FAM205BPQ63HN1 556 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 ZNF517Q6ZMY9 492 aaPredicted RBP18.4■□□□□ 0.54
SMPD1-201ENST00000342245 LIX1LQ8IVB5 337 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 TMEM199Q8N511 208 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 AADATQ8N5Z0 425 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 BRSK1Q8TDC3 778 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 P2RY11Q96G91 374 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 CEP41Q9BYV8 373 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 AMBRA1Q9C0C7 1298 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 XYLT2Q9H1B5 865 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 TMEM134Q9H6X4 195 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 ZFP14Q9HCL3 533 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 EHD3Q9NZN3 535 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 RCOR3Q9P2K3 495 aaPredicted RBP18.4■□□□□ 0.54
SMPD1-201ENST00000342245 DNAJB9Q9UBS3 223 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 BOLA1Q9Y3E2 137 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 ORC6Q9Y5N6 252 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 EP400Q96L91 3159 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 F5H423 210 aaPredicted RBP18.4■□□□□ 0.54
SMPD1-201ENST00000342245 BET1O15155 118 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 NOS1APO75052 506 aaPredicted RBP18.4■□□□□ 0.54
SMPD1-201ENST00000342245 GDF11O95390 407 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 ANGPTL1O95841 491 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 ALDOCP09972 364 aaKnown RBP18.4■□□□□ 0.54
SMPD1-201ENST00000342245 YWHAQP27348 245 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 GGT5P36269 586 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 TCP10Q12799 353 aa18.4■□□□□ 0.54
SMPD1-201ENST00000342245 KCNAB2Q13303 367 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms