RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 ILF3Q12906 894 aaKnown RBP eCLIP15.15■□□□□ 0.02
COL11A2-201ENST00000341947 ITGB3BPQ13352 177 aaPredicted RBP15.15■□□□□ 0.02
COL11A2-201ENST00000341947 DCTN2Q13561 401 aaKnown RBP15.15■□□□□ 0.02
COL11A2-201ENST00000341947 MYBPC3Q14896 1274 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 FAM129CQ86XR2 697 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 C12orf56Q8IXR9 622 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 UPF1Q92900 1129 aaKnown RBP eCLIP15.15■□□□□ 0.02
COL11A2-201ENST00000341947 NUDT4Q9NZJ9 180 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 ING4Q9UNL4 249 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 TAF4O00268 1085 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 FPGTO14772 594 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 B4GALT4O60513 344 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 KCNA5P22460 613 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 LCLAT1Q6UWP7 414 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 CADM2Q8N3J6 435 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 SLC9A6Q92581 669 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 RIPOR3Q96MK2 946 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 TSSK3Q96PN8 268 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 OSER1Q9NX31 292 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 EGFL7Q9UHF1 273 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 TRAFD1O14545 582 aaPredicted RBP15.15■□□□□ 0.02
COL11A2-201ENST00000341947 ALOX15BO15296 676 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 NDST3O95803 873 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 ADRA1BP35368 520 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 MNDAP41218 407 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 CDH4P55283 916 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 RAB2AP61019 212 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 DUPD1Q68J44 220 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 OTOP3Q7RTS5 596 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 CMC1Q7Z7K0 106 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 GALNT7Q86SF2 657 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 AMIGO2Q86SJ2 522 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 XYLT1Q86Y38 959 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 ATAD1Q8NBU5 361 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 SLAIN1Q8ND83 568 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 PSMA8Q8TAA3 256 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 STYXQ8WUJ0 223 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 S100ZQ8WXG8 99 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 KLRG1Q96E93 195 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 PNPOQ9NVS9 261 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 NDRG2Q9UN36 371 aaKnown RBP15.15■□□□□ 0.02
COL11A2-201ENST00000341947 PRKAB1Q9Y478 270 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 DEPDC5O75140 1603 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 DMPKQ09013 629 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 C2orf80Q0P641 193 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 RIPK1Q13546 671 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 NOMO1Q15155 1222 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 KCNA10Q16322 511 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 MSANTD2Q6P1R3 559 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 ABHD15Q6UXT9 468 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 ZNF483Q8TF39 744 aaPredicted RBP15.15■□□□□ 0.02
COL11A2-201ENST00000341947 TSEN15Q8WW01 171 aaKnown RBP15.15■□□□□ 0.02
COL11A2-201ENST00000341947 RTKNQ9BST9 563 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 TAPBPLQ9BX59 468 aa15.15■□□□□ 0.02
COL11A2-201ENST00000341947 CHST10O43529 356 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 SPATA31C1P0DKV0 1188 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 DRG2P55039 364 aaKnown RBP15.14■□□□□ 0.01
COL11A2-201ENST00000341947 NR1H2P55055 460 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 RNF31Q96EP0 1072 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 CSPG4P5Q96PW8 444 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 HSD17B14Q9BPX1 270 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 PADI3Q9ULW8 664 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 TP73O15350 636 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 PSIP1O75475 530 aaKnown RBP15.14■□□□□ 0.01
COL11A2-201ENST00000341947 SLC7A2P52569 658 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 B3GNT5Q9BYG0 378 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 ZFP37Q9Y6Q3 630 aaPredicted RBP15.14■□□□□ 0.01
COL11A2-201ENST00000341947 CLDN9O95484 217 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 TPSB2P20231 275 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 STXBP1P61764 594 aaKnown RBP15.14■□□□□ 0.01
COL11A2-201ENST00000341947 ACAP2Q15057 778 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 TPSAB1Q15661 275 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 C7orf61Q8IZ16 206 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 SLC34A3Q8N130 599 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 ATP6V1C2Q8NEY4 427 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 WRAP53Q9BUR4 548 aaKnown RBP15.14■□□□□ 0.01
COL11A2-201ENST00000341947 CD84Q9UIB8 345 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 FSBPO95073 299 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 LYPLA2O95372 231 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 LAMP2P13473 410 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 CYP3A5P20815 502 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 CTSKP43235 329 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 ZBTB6Q15916 424 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 MED27Q6P2C8 311 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 CRELD1Q96HD1 420 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 PWWP2AQ96N64 755 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 NPAS2Q99743 824 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 TBC1D10AQ9BXI6 508 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 CCDC177Q9NQR7 707 aaPredicted RBP15.14■□□□□ 0.01
COL11A2-201ENST00000341947 MIOSQ9NXC5 875 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 DHRS7Q9Y394 339 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 CASKO14936 926 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 IFNA6P05013 189 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 KIR3DL1P43629 444 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 POLR2JP52435 117 aaKnown RBP15.14■□□□□ 0.01
COL11A2-201ENST00000341947 NRG1Q02297 640 aaPredicted RBP15.14■□□□□ 0.01
COL11A2-201ENST00000341947 TSC22D1Q15714 1073 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 TBC1D25Q3MII6 688 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 CERS6Q6ZMG9 384 aa15.14■□□□□ 0.01
COL11A2-201ENST00000341947 XAGE5Q8WWM1 108 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms